Aromatoleum bremense: pbN1_29150
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Entry
pbN1_29150 CDS
T07149
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
abre
Aromatoleum bremense
Pathway
abre03030
DNA replication
abre03430
Mismatch repair
abre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
pbN1_29150 (holA)
03430 Mismatch repair
pbN1_29150 (holA)
03440 Homologous recombination
pbN1_29150 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abre03032
]
pbN1_29150 (holA)
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_29150 (holA)
Enzymes [BR:
abre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
pbN1_29150 (holA)
DNA replication proteins [BR:
abre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
pbN1_29150 (holA)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
pbN1_29150 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QTQ32903
LinkDB
All DBs
Position
complement(3049405..3050412)
Genome browser
AA seq
335 aa
AA seq
DB search
MNLRPEQLSAHLAKPLAPLYLLHGNEPLLVLEAADLVRAAARRQGFDERETLVVGQGFRW
ESLTAAAGNLSLFGDSKLIDLRIPGGKPGRDGGDALQRYARSLASGIVTLVTLPEIDWAA
RKTAWFTALTQAGVTVELNAPERERLGEWIAARLARQKQTASPEALAFIADHVEGNLLAA
HQEILKLGLLHAEGNLSMEDAQDAVLNVARYDIAKLRDALVEGDPVRCTRLLEGLQGEGA
APPLVLWALANEIRMLATLCAGKAAGQPLATLFKAERIFDERRKHALSTALVRFRIGTLR
AALLHAAKIDRIIKGLAPGDVWDEFLQLAMRLARR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctgcgccccgagcagctttccgcacatctcgcaaagccgctcgccccactctac
ctgctgcacggcaacgagccgctgctggtgctcgaagctgccgacctggtgcgcgcggcg
gcgcgccgtcagggcttcgacgagcgtgaaacgctggtcgtcgggcagggtttccggtgg
gaaagcttgaccgccgcagcaggaaatctgtcgttgttcggtgactcgaagctgattgac
ctgcgcattccaggcggaaagccgggacgcgacggcggcgacgcccttcagcgttatgcg
cgcagcctcgccagcggtatcgtgacgctggtcacgctgcccgagatcgactgggcggcg
cgcaagacagcgtggttcaccgccttgacgcaagccggcgtgacggtggagctcaacgcc
ccggaacgcgagcgccttggagaatggatcgcggcacggctggcgcggcaaaagcagacg
gcaagcccggaagcgctcgctttcatcgccgaccacgtcgaaggcaatctgctcgccgca
caccaggaaatcctcaagctcggcctgctccatgcagaaggaaacctcagcatggaggac
gctcaggatgcggtgctgaacgtcgcccgctacgacattgccaagctgcgcgacgcgctc
gtcgaaggcgacccggtccggtgcacacgacttctggaaggcctgcagggcgaaggcgcg
gcgccgccgctggtgctgtgggcactcgcgaacgaaatcaggatgctggccacgctgtgc
gcgggaaaagccgccggccagccgcttgcaacgctattcaaggccgaacgaatcttcgac
gaacggcgcaagcacgcgctaagcactgcgctggtgcggtttcgaatcggcacgcttcgc
gccgcgttgctgcacgcggcgaagatcgaccgcatcatcaaggggctcgctcccggcgat
gtgtgggacgaattcctgcagctggcgatgcgactcgcacgacgctga
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