Aromatoleum bremense: pbN1_29270
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Entry
pbN1_29270 CDS
T07149
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
abre
Aromatoleum bremense
Pathway
abre03030
DNA replication
abre03430
Mismatch repair
abre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
pbN1_29270 (dnaE)
03430 Mismatch repair
pbN1_29270 (dnaE)
03440 Homologous recombination
pbN1_29270 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abre03032
]
pbN1_29270 (dnaE)
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_29270 (dnaE)
Enzymes [BR:
abre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
pbN1_29270 (dnaE)
DNA replication proteins [BR:
abre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
pbN1_29270 (dnaE)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
pbN1_29270 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QTQ32915
LinkDB
All DBs
Position
3061861..3065355
Genome browser
AA seq
1164 aa
AA seq
DB search
MTAPHEPRFIHLRLHSEYSISDGIVQIDQAIARAAADAMPALGISDLANLFGMVKFYKGA
RGKGMKPVVGVDTWITNDADRDKPFRALLICRNRKGYGQLCELLTRAYLDNKYRSRAEMR
RQWFADGAASDLLCLSGAMGGDIGQALVNGNPDVAERLAAEWMQLFPDAFYIELQRAGHP
GTEAYIRQAVQLAGKLGLPVVATHPVQFLKPEDFKAHEARVCIAQGYVLADKRRPRDFTE
EQYFKSQDEMCGLFADIPEALENSVEIARRCSLTVQLGKNFLPQFPTPEGMTLDDFLVAE
AKAGLEVRLAELYPDEAERERQRPTYEDRLKFETDTIVQMGFPGYFLIVADFINWAKENG
VPVGPGRGSGAGSLVAYSLRITDLDPLAYALLFERFLNPERVSMPDFDIDFCQDNRYRVI
EYVRSRYGKEAVSQIATFGTMASKAVVRDVGRVLDLPYGLCDRLSKLIPIEGAKPVSLAK
AYEMESQIGEMMKDGNDGESVQELWSLAEPLEGLSRNVGMHAGGVLIAPGKLTDFCPLYI
ADGDDATPVSQFDKDDVEAVGLVKFDFLGLRNLTIIELAVEYVERLTGEKPDLAALPFTD
PAAYQILKDANTTAIFQVESEGMKKLLKKLAPDRFEDIIAVLALYRPGPLGSGMVDDFIL
RKKGQQEIDYFHPDLKPCLEPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKAE
EMALHRETIAAGAKQKGYDPALAEQLFDLMTKFAEYGFNKSHTAAYAVVTYHTAWLKAHH
CAAFMAATMSADLDNTDTIRIFFEDAVANGVTILPPDVNASDFRFVPTDRKTIRYGLGAV
KGAGEPAVRAILAAREAGGPFRDLFDFCARVDRRAVNRRVIEALIRAGAFDLIEPSGSAD
RARLLATVSLAMEAAEQAAANALQGGLFDLIPEAAGAPPEYVRARPWTERERLKEEKLAI
GFFLSGHPFNSFRKEVRRFVRRPLAELEPSRDLLMLAGVVMDVRTKMTGRGKMAFVVLDD
GSQVREVSVFSELFDSQRSKIVTDEVLVVEGKVSNDDFTGGLRIVADKLMTLGEARSRFA
RALQLTVNGEVKAAGGASAAAERLQSLLAPFREGGCPVRLRYRNEVAEADLPFGEGWRVR
LDDALLDGLRQWLPADAVEVIYPN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgactgccccacacgaaccccgtttcatccatctgcggctgcactccgaatattcgatc
tccgacggcatcgtccagatcgaccaggcgatcgcccgcgccgccgccgatgccatgccg
gccctcggcatttccgacctggccaacctcttcggcatggtcaagttctacaagggcgcc
cgcggcaagggcatgaagccggtcgtcggcgtcgacacctggatcaccaacgacgcggac
cgcgacaaacccttccgcgccctgctgatctgcaggaaccgcaagggttacgggcagttg
tgcgagttgctgacgcgtgcctatctcgacaacaagtaccgcagccgcgccgagatgcgc
cggcagtggttcgccgacggcgccgcgtcggatctgctctgcctgtcgggcgcgatgggc
ggggacatcggccaggcgctggtgaatggcaatccggacgtcgcggagcgactcgcagcc
gagtggatgcagctgtttcccgacgcgttctacatcgagctgcagcgcgccggccatccc
ggcaccgaagcttatatccgccaggccgtgcagctggcgggcaagctggggctgccggtc
gtcgcgacacaccccgtgcagttcctcaagcccgaggacttcaaggcgcacgaggcgcgc
gtgtgcatcgcgcagggctacgtgcttgccgacaagcgccggccgcgcgacttcaccgag
gagcagtacttcaagagccaggacgagatgtgcgggttgttcgccgacatcccggaggcg
ctcgaaaattccgtcgaaatcgcccggcgatgttcgctgacggtgcagctcggcaagaac
ttcctgccgcagttcccgacgccggaaggcatgacgctcgacgacttcctcgtggccgaa
gcgaaggccgggctcgaagtgcggctcgcggagctctacccggatgaggcggagcgcgag
cgccagcgcccgacctatgaggaccggctcaagttcgagaccgacacgatcgtccagatg
ggctttcccggctacttcctgatcgtcgccgacttcatcaactgggcgaaggaaaacggc
gtgccggtcgggccggggcgcggttccggcgccggttcgctcgtcgcatacagcctgcgc
atcaccgacctcgacccgctcgcgtacgcgctgctgttcgagcgcttcctgaacccggaa
cgggtgtcgatgcccgacttcgacatcgacttctgccaggacaaccgctaccgcgtcatc
gagtacgtgcgcagccgctacggcaaggaggcggtcagccagatcgcgaccttcggcacg
atggcgtcgaaagcggtcgtgcgcgacgtcggtcgcgtgctcgacctgccgtacgggctg
tgcgatcgcctgtcgaagctgattccgatcgaaggcgcgaagcccgtctcgctcgccaag
gcctacgagatggagtcgcagatcggcgagatgatgaaggacggcaacgacggcgagtcg
gtacaggagctgtggagcctcgccgaaccgctcgaaggtttgagccgcaacgtcggcatg
cacgccggcggcgtgctgatcgcgccgggcaaactcaccgacttctgcccgctctacatc
gccgacggcgacgacgcgacgccagtgtcgcagttcgacaaggacgacgtcgaggcggtg
ggcctcgtgaagttcgatttcctcggcctgcgcaacctcacgatcatcgagctcgccgtc
gagtacgtcgaacgcctcaccggcgaaaaacccgatctcgccgcgctgccgttcaccgac
ccggccgcctaccagatcctcaaggacgcgaacaccaccgcgatcttccaggtggaatcg
gagggcatgaagaagctgctgaaaaagctcgcccctgaccgcttcgaggacatcatcgcg
gtgctcgcgctgtaccgcccggggccgctgggctcggggatggtcgatgacttcatcctg
cgcaagaaaggccagcaggagatcgactacttccatccggatctgaagccctgcctcgag
ccgacgtatggcgtgatcgtgtatcaggaacaggtgatgcagatctcgcagatcatcggc
ggctacacgctcggcggcgccgacatgctgcgccgcgcgatgggcaagaagaaggccgag
gaaatggcgctgcaccgcgagacgatcgccgccggtgcgaagcagaagggctacgacccg
gcgcttgccgagcagctcttcgacctgatgacgaagttcgcggagtacggcttcaataag
tcgcacaccgcggcctacgcggtcgtcacatatcacaccgcgtggctgaaggcgcaccat
tgcgcggccttcatggcggccacgatgtcggctgatctcgacaacaccgacacgatcagg
atcttcttcgaggatgccgtcgcgaacggcgtgacgatcctgccgccggacgtcaacgcc
tccgacttccgcttcgtgccgaccgaccgcaagacgatccgctacggcctcggcgccgtg
aaaggggcgggggagcctgcggttcgcgcgatcctcgcggcacgggaggccggcggaccg
ttccgcgacctgttcgatttctgcgcgcgggtcgatcggcgcgcggtcaaccgtcgcgtc
atcgaggcgctgatccgtgccggcgcgttcgacctcatcgagccgagcggcagcgccgac
cgcgcgcgcctgctcgcgaccgtgagcctggcgatggaggcggccgagcaggcggcggcg
aatgcgctgcaaggggggcttttcgacctgatcccggaagcggccggggcaccgccggag
tacgtccgcgcgcgcccgtggacggaacgcgagcggctcaaggaagagaagctcgcgatc
ggcttcttcctctccggccatccgttcaacagtttccgcaaggaggtgcgccgctttgtc
cgtcggccgctcgccgagctcgaaccttcgcgggatctgctgatgctcgccggcgtcgtc
atggacgtgcgcacgaagatgaccggccgcggcaagatggctttcgtcgtgctcgacgac
ggcagccaggtgcgcgaagtgtcggtgttctcggaactgttcgactcgcagcgcagcaag
atcgtcacggacgaagtgctggtggtcgaaggcaaggtgagcaacgacgactttaccggc
gggctgcgcatcgtcgccgacaagctgatgacgctcggcgaagcgcgctcccggtttgcc
cgcgcgctgcagctgacggtcaacggtgaagtgaaggctgcgggcggtgcgagcgccgcg
gccgagcgtctgcaaagcctgctggcgccgttccgcgaaggaggctgcccggtccggctg
cgttaccgcaacgaggtggccgaagcggacctgcctttcggcgagggctggcgcgtgcgt
cttgacgacgcgctgctcgacggcctgcgccagtggctgccggcggacgcggtcgaagtg
atctatccgaactga
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