Aromatoleum bremense: pbN1_39780
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Entry
pbN1_39780 CDS
T07149
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
abre
Aromatoleum bremense
Pathway
abre03030
DNA replication
abre03430
Mismatch repair
abre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
pbN1_39780 (dnaQ)
03430 Mismatch repair
pbN1_39780 (dnaQ)
03440 Homologous recombination
pbN1_39780 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abre03032
]
pbN1_39780 (dnaQ)
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_39780 (dnaQ)
Enzymes [BR:
abre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
pbN1_39780 (dnaQ)
DNA replication proteins [BR:
abre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
pbN1_39780 (dnaQ)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
pbN1_39780 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QTQ33961
LinkDB
All DBs
Position
complement(4136327..4137046)
Genome browser
AA seq
239 aa
AA seq
DB search
MRQIVLDTETTGLDWRNGDRVIEIGCVELLNRNLTGRHYHVYINPERGIDAEAIAVHGIT
EDFLADKPTFSAIAAEFEDFIRDAELIIHNANFDVGFLNHELSRLGRGKLDSLCAGVIDT
LKMAKEQNPGKKASLDALCDRHQIDNASRTLHGALLDAELLAEVYLAMTRGQESLIMALE
EPVPGSAEAGGVLVDRPPLKVLRASGEELAEHGRVLHDIAKATKGTCLWIAPEPEAAAA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagacagatcgtcctcgacacggaaaccaccggcctcgactggcgcaacggcgaccgc
gtcatcgaaatcggctgcgtcgagctgctgaaccgcaacctgacggggcggcattaccac
gtctatatcaacccggagcgcggcatcgatgccgaggcgatcgcggtgcacggcatcacc
gaggacttcctcgccgacaagccgacgttcagcgccatcgcggccgagttcgaggatttc
atccgtgacgcggaactgatcatccataacgcgaacttcgacgtcggcttcctgaaccac
gagctgtcgcggctcgggcggggaaagctcgacagcctttgcgcgggggtcatcgacacg
ctgaagatggcgaaggagcagaacccgggcaagaaggcgtcgctcgacgcgctgtgcgac
cggcaccagatcgacaatgcgtcgcggacgctgcacggcgcgctgctcgacgcggagctg
ctcgccgaagtctacctggcgatgacgcgcggccaggagagcctgatcatggcgctcgag
gagcccgtgccgggcagcgccgaagccggcggcgtgctcgtcgatcggcccccgctgaaa
gtgctccgcgcgagcggcgaagagctggctgaacatggccgggtgcttcacgacatcgcg
aaagcgacgaaaggcacctgcctgtggatcgcgcccgagccggaagcggccgccgcctga
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