Aromatoleum bremense: pbN1_39940
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Entry
pbN1_39940 CDS
T07149
Name
(GenBank) Uracil-DNA glycosylase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
abre
Aromatoleum bremense
Pathway
abre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
pbN1_39940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_39940
Enzymes [BR:
abre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
pbN1_39940
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
pbN1_39940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QTQ33977
LinkDB
All DBs
Position
complement(4155397..4156233)
Genome browser
AA seq
278 aa
AA seq
DB search
MNERRDAVLREMGLAPLWRRRGTSQALQADEPEAVPEEPAAARPPAREAGDVSTRERQAS
HRPQPVPAPQPAPVAVAHAADSTDERAGRIETLDWEALEADIRACTACRLCERRRQAVPG
VGDRLADWMFVGEGPGAEEDLRGEPFVGVAGKLLDAMLAAIGLKRGEGVYIANAVKCRPP
HNRTPGNDEIEACAPYLARQIALVQPRLLVALGRPAARALLGVDVAIGAARGQVFRYRGT
PVVVTYHPAYLLRNQRDKAKVWEDLCFARELMEKTTPA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcgtcgggatgcggtactgcgcgaaatgggcctcgcgccgctgtggcggcgg
cgcggaacgtcgcaggcgctgcaggcggacgagccggaagcagtgccggaagaaccggct
gcggcgcgcccgcccgcgagggaagccggcgacgtctccacgcgggaacgacaggcctcg
catcggccgcagccggtccctgcgccgcagccggcgcccgttgcggtcgcccatgcggcc
gattccacggacgagcgcgccgggcggatcgaaaccctggactgggaagcgctcgaggcc
gacatccgtgcgtgcacggcatgccgcctgtgcgagcggcgtcgccaggcggtgccgggt
gtcggcgatcggctggcggactggatgttcgtcggcgaggggcccggggcggaagaagac
ctgcgcggcgaaccgttcgtcggcgttgccggcaagctcctcgacgcgatgctggcggcg
atcggattgaagcggggcgaaggggtatatatcgcgaacgcggtcaagtgccggccgccg
cacaaccgcaccccgggaaacgacgagatcgaggcctgcgcgccctatctcgccaggcag
atcgcactggtgcagccgcgcctgctggttgcgctgggtcgtccggcggcgcgcgcgctg
ctcggcgtcgatgtggcaatcggcgcggcacgcggacaggttttcaggtatcgcgggaca
ccggtggtcgtgacctaccacccggcctacctgctgcgcaatcagcgggacaaggcgaaa
gtctgggaagacttgtgctttgcccgggagctgatggaaaaaacgacgccggcctga
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