Argiope bruennichi (wasp spider): 129958340
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Entry
129958340 CDS
T09870
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X1
KO
K19719
collagen type II alpha
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru04512
ECM-receptor interaction
abru04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129958340
04518 Integrin signaling
129958340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
abru00536
]
129958340
Glycosaminoglycan binding proteins [BR:
abru00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129958340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
FnI_RECK
Motif
Other DBs
NCBI-GeneID:
129958340
NCBI-ProteinID:
XP_055926733
LinkDB
All DBs
Position
X1
Genome browser
AA seq
1481 aa
AA seq
DB search
MELSFFFTYILWILLSNTVSAQYYDGIDDIDDATVCIFDGVKYLDQEEWKPDSCTSCRCY
LGNTVCDTEECPDLECKTQKYIPLGKCCPVCAEEEAVFGPEETVSSRPRPSYPDRTVPAL
GLPDHVVVPVVGPPGISGEPGIPGSPGERGNPGHPGSHGSPGQPGPPGPPGHLGYNWFNQ
LALQGGNGDKGPAPDAFHFMQAQVGPVGQRGPPGPPGPSGPQGFQGIRGETGDAGPAGPP
GLPGPRGLPGIPGKDGEPGEDGRPGPPGPPGPQGSRGPPGLPGLPGAKGHRGFPGLDGAK
GEQGVAGEKGVAGTPGKMGIPGPMGPPGSRGERGREGPPGPPGLRGVDGLPGQPGPTGPI
GRSGSPGFPGSPGPKGEAGAIGPKGSQGDQGVRGEAGSPGVNGEAGQPGPAGKDGLNGER
GSPGDRGPRGVPGFPGAVGPPGLVGSQGLPGPKGSQGNRGEPGVRGESGRKGEQGSVGPR
GLPGPSGSQGKRGKSGPPGPQGSQGPPGERGPAGLRGLPGPEGSAGAKGIPGDRGLEGSP
GPKGSQGEAGRQGPPGMQGLRGSPGSSGISGKDGSPGDRGPPGLDGKQGPPGPQGVQGLP
GLIGLPGVKGEKGDRGTDGLPGVQGPQGRRGDSGKDGLPGLQGARGPPGQPGSKGEAGLP
GSRGFQGIPGLVGAAGQPGKNGEPGTPGAPGQIGPQGQRGERGFPGERGPAGLPGPIGIR
GETGPAGKDGAAGPRGERGPKGSAGPSGLLGLPGRRGDFGPPGPKGERGDSGPMGPAGSQ
GRPGEPGPMGLIGVPGNQGEPGEKGAIGQVGPQGNPGPQGLQGEKGQQGSQGQQGFPGPV
GHPGPPGSKGVQGLTGSKGETGDIGPPGPPGQRGVQGLQGPTGDTGSKGDEGKKGHAGFP
GTPGLPGTPGVPGKQGNPGVSGSSGPPGLKGPKGDSGRIGTPGPPGTPGIPGFPGAKGDV
GSEGRPGPQGPAGPPGPSGDKGPPGLPGLQGRQGPQGTKGSQGERGPEGKPGPDGNPGLQ
GLPGQPGPTGVPGERGPEGPSGKDGPPGAPGRVGDKGPAGSPGLPGPTGLPGLQGIPGPS
GPSGPPGERGQRGERGIQGAPGPQGQRGVPGPIGSTGDKGPKGDVGAAGEKGHRGLMGLQ
GLPGPVGPPGDKGMTGEPGPPGMKGPAGPKGPPGNPGNPGPPGILGIPGPRGPTGESGRD
GPPGLTGPPGPPGPPGPGFQYDAAALAALMSQGQVKGPDPLFGDQPDLTSASDEEKKELI
FKFYEKLVKDYAESRKPTGKKEFPAKTCKELAEAQPDLPSGKYWIDPNGNNRNDAIEVFC
NMATKETCIIPDPDEIPRESHVRGRGQKTWFSEMESGSPFHYKIDHGQLTFLQLLSEKAS
QNITYHCRNSIAYYDAKHKFFKRAVRLMAYNDLELSAEGNKHFVYTSSFDGCQKRDDDWS
YTVLHYSTEKPQRLPVIDIAPRDVGLQNQEFGISIGQACFV
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggagctatcattctttttcacttacatcctttggattttactttccaacacggtctca
gctcagtattacgatggaatagatgatatagatgacgcaactgtatgcatttttgacggt
gtaaagtatcttgaccaagaagaatggaaaccggattcctgtacatcttgcagatgttac
ttgggtaataccgtttgcgatacggaagaatgtccagatttagaatgtaaaactcagaag
tacatacctctaggaaaatgctgccctgtttgtgcagaggaggaggctgtttttggacct
gaagaaactgtaagctcgaggcctagaccatcttatcctgatcgaactgtccctgctctt
ggacttccagatcatgttgtggtaccagttgttggacctcctggcattagtggtgaacca
ggaattcctggatctcctggagaacggggaaatcctgggcaccctgggagtcatggatca
cctggtcaacctggcccacctggacctcctggacatttaggatataactggtttaatcag
ttggctcttcaaggcggtaatggagataaaggtcctgctcctgatgcttttcattttatg
caagctcaagttgggcctgttggacaacgaggaccacctgggcctcctggaccatctgga
cctcaagggtttcaaggaataagaggcgaaactggagatgccggccctgctggaccacct
ggacttccaggacctcgaggtttaccaggaatacctggaaaagatggagagcctggagaa
gatggtaggcctggacctcctgggccacctggtcctcaaggatcaagaggtccacctggt
ttacctggattgcctggagctaaaggtcatcgtggatttcctggcttagatggagccaaa
ggagaacaaggagttgcaggtgaaaaaggagttgcaggtacacctggaaaaatgggaata
ccaggccccatgggccctccaggatctagaggagaaaggggtagagaaggaccccctggg
cctcctggccttagaggagtagatggattacctggacaaccaggcccgactggaccaata
ggaagatcaggatcacccggatttcctggttcacctggaccaaaaggagaagctggtgca
atcggtccaaaaggtagtcaaggtgatcaaggagtaagaggtgaagctggcagtcccggt
gtaaatggagaagcaggtcaaccaggtcctgctggaaaagatggcttgaatggtgagaga
ggaagtccaggagatagagggcctcgtggcgtacctggatttcctggagctgttggaccg
cctggacttgttggcagtcaaggattacctggaccaaagggttcgcagggaaatcgaggc
gaacctggagtcagaggggaatctggtcgtaagggagaacaaggttcagttggacctaga
ggccttcctggaccctctggtagtcaaggaaaacgaggtaaatctggtcccccaggtcct
caaggttctcaaggaccacctggtgaacggggtccagcaggcttgagaggtcttccgggt
cctgaaggtagtgctggtgcaaaaggaattcctggtgatcggggtttggaaggttctcca
gggccaaaaggatcacagggtgaagctggtcgccaaggtccccctggaatgcaaggatta
aggggatctccaggatcatcaggaatatcaggaaaagatggatctccgggagatagaggt
cctcctggattagatggaaaacaaggcccccctggaccgcagggtgtccaaggattgcca
ggattaattggattaccaggagttaaaggagaaaagggagacagaggtactgatggatta
cctggagttcaaggacctcaaggtagacgaggtgattccggtaaagacggattacctggt
ttgcaaggtgcacgaggtccaccaggtcaacctggttctaaaggagaagcaggacttcca
ggctctcgaggcttccaaggaattcctggtttagttggtgctgcaggccagcctggaaag
aatggtgaaccaggtactcctggagctccaggacaaatcggaccacaaggacaacgtgga
gagagaggattccctggtgaaagaggacctgctggtctccctggaccaattggaattcgc
ggagaaacaggaccagctggaaaagatggtgctgctggcccaagaggtgaaagagggcct
aaaggaagtgcaggtccatctggattattgggattacctggtagacgaggagactttggg
cctccaggtccgaagggtgaacgtggtgattctggccccatgggtcctgctggctcgcaa
ggaaggcctggtgaacctggaccaatgggattaattggtgttcctggcaatcaaggagaa
ccaggtgaaaagggagcaattggccaagttggtcctcaaggaaaccctggtccacaaggc
ctgcaaggtgaaaaagggcagcaaggttctcaaggacagcaaggattccctggacctgtg
ggtcatcctgggccaccaggcagtaaaggagttcaaggattaactggatctaagggtgaa
actggagatattggacctcctggacctcccggccaacgtggtgtgcaaggtttgcaagga
cctactggagatactgggtctaaaggtgatgaaggcaaaaagggccatgctggatttccc
ggtactcctggattgccaggaactcctggtgtacctgggaaacaaggtaatcccggcgtg
tctggctcatctggtccaccaggactgaaaggtccaaaaggggattctggtagaattggc
acacctggaccacctggtactccaggcattcctggatttccaggagcgaaaggggatgtt
ggatctgaaggaagaccaggacctcaagggcctgctggtccacctggaccttctggtgat
aaaggtcctcccggtctgcctggtctgcaaggaagacagggtcctcaaggtactaaaggt
tctcagggggaaagaggcccggaaggcaagccagggccagatggaaatcctggattacaa
ggtttgccaggacaacctggtcctactggtgtaccgggagaaagaggaccagaaggacct
tcaggaaaggatggacctcctggtgctcctggtagggttggtgataagggaccagctggt
tcacctggattgcctggtccaacaggtttacctggccttcaaggcatccctggtccatca
ggaccaagtggacctcctggagaacgaggccagaggggagaaagaggtatacaaggtgct
cctggacctcaagggcagcgaggtgtaccaggccctattggttcaactggagataaaggc
cccaagggtgatgttggagctgctggtgagaaaggtcatagaggtttaatggggctacaa
gggcttcctggacctgtgggtccacccggagataagggcatgactggagaacctggacca
cctggaatgaagggtccagctgggcctaaaggtcctccaggcaatccaggaaatcctggg
cctccagggatattaggaataccaggacctagaggtccaacaggtgaatctggaagagat
ggacctcctggtcttacaggcccacctggtcctcctggtccaccagggccaggtttccaa
tatgatgctgctgcgttggccgcattaatgtctcagggacaagttaagggaccagatcct
cttttcggtgatcaaccagatctaacatctgcttcagatgaagagaaaaaagagctaata
tttaagttctatgaaaagctggtgaaagattatgcagaatcacgaaaaccaactggaaag
aaagaattccctgctaagacatgcaaagaattagccgaagcacaacctgatcttccaagt
gggaaatattggattgatcctaatggaaacaaccgtaatgatgctattgaagttttctgc
aatatggcgacaaaagaaacttgtataataccagatcctgatgagataccacgagaaagc
catgtacgaggacgtggacaaaaaacatggttcagtgaaatggagtctggatcacccttc
cactacaagatcgatcatggacagcttacattccttcaacttttgagtgaaaaggcatcc
cagaacattacttatcattgtcgcaattctattgcatattatgacgctaaacataaattc
ttcaaaagggctgttcgattaatggcatacaacgatcttgaattatcagctgaaggaaat
aaacattttgtctacacctcttcatttgatggctgccagaaaagagatgatgattggtcc
tatactgtgctacattattccactgaaaagcctcagaggctacctgttattgacattgca
ccacgagatgttggcttacaaaatcaagaatttggcattagtattggacaagcatgcttt
gtgtga
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