Argiope bruennichi (wasp spider): 129959315
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Entry
129959315 CDS
T09870
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129959315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abru03021
]
129959315
03019 Messenger RNA biogenesis [BR:
abru03019
]
129959315
Transcription machinery [BR:
abru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129959315
Messenger RNA biogenesis [BR:
abru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129959315
U7-dependent histone pre-mRNA processing factors
129959315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
MAP6
Motif
Other DBs
NCBI-GeneID:
129959315
NCBI-ProteinID:
XP_055928109
LinkDB
All DBs
Position
X1:88503721..88517080
Genome browser
AA seq
1630 aa
AA seq
DB search
LPASLEEKHHFPASSEEIRHHLPASLEEKHHFPASSEEIRHHLPASLEEKHHFPASSEEI
RHHLPASLEEKHHFPASSEEIRHHLPASLEEKHHLPASSEEIRHHLPASLEEKHHLPASS
EEIRHHLPASLEEKHHLPASFEERRYHPSTSQDERRYHPSTFQDERRFQPSTSEDERRFQ
SSSSQDERRFQSSPSKDERRFHSTPSKDERFHSTPSKDERRFQSSPSKDERRFHSTPSKD
ERRFQSAPSKDERRFQSSPSKDERRFQSSPSKDERRFQSSPSKGERRFQSSPSKDERRFQ
SSPSKDERRFQSSPSKDERRFQSSPSKDERRFQSSPSKDERRFRSSPSKDERRFRPSPSK
DERRFRPSPSKDERRFRPSPSKDERRFQPSPSQDERRFRPSPSKDERRFQPSPSQDERRF
QPSPSQDERNKPSISEDERKYKPSTSRSRTSADYALDLQYFLKKRAESDDTSHKPRKKVI
DIRLSTAAQFFEEEETVEETVTTERIAKLLRNASLDVDVQSKLKTLQLVQKLIIQKEPKL
LDNFLDEVVSFQHDKSPEIRIFVLKFIEDACKFDIQILPKIVGNMKILLDDTTIFVKKKV
IQTTAKLYILTIKWFCSAKSVDEVMEATWACMAQLKRNIFALLESDNEGIRALVVKFMER
IVIIQTFRDQYSQDELSLDKIPVILNIFRPRKMEEEAKVIFQRIVDLHCASHVSSFNLMT
CMQVLTTITRKRFEFFPKVLQAFESLHANLPPTLSQSQVSSVRKSLKLQLFILVKHPGAV
EFHSRISIMLSDLGASPQQINKCFPSVENTKKRAFSRDFDRDWVKRSKLGDEFFNTKASG
SSSRSGSMKNKAKDTAIDITAQDLVPKLTPINVADLVLVSMLSLTPHLPTHFRSTYTPIA
AAGTEPQVKHLSRLLATQLTIAGLGKGAEEMKMQAHNAKLDLSDDDDEFASKQIQTVVGQ
TVDPRPKKQGLVLMPSGGPPTKSNKYSKKLDFASVAKPFTDEESDRLSRAAFNRILNAEK
AIAKRGTACMRTKILTSLATQFRGDFATDLKNHILENPRSRLELAFSWIYQEYSSYKGFE
SSTERPVEFYEETIDKLVGGILKTDDPNRLAFSRFFVEPPFITSGMAECLKKICIDEAVT
EIGIQLAKNMTIRRPTKKLLFLGVICDLTLHEKVHIRSKAVSAAVEVYENGSMRSFIEAF
ALRSLKFLLHDAPSPSQFIYFTQPPRAWSEELTKLCLQLYLAVLPMNHKLIHDLGTVYVE
TSADIKRTILRALETPFKGMSMESPELLRFVEKCPKGAETIVTRIIHILTDKAPPSAELV
SRVRDLYRKRVPDVRFLIPIINGLTKAEVIAALPELIKLNPTVVKEVFHRLLGSSFPSPV
TPSELLVALHKIEPEKCNLKIVIKATSLCLEEKQVYTQVVLAMVLQELMEINPLPILFMR
TVIQSLTNHPHLLGFVTNILQRLILKQVWNERRIWEGFIKCCQRTKPQSFQVLLQLPGPQ
LQEALDSCPDLRDPLCHFVRSFTDHQKSHVTKEVRAVLEGFRIEMGLKDESDSISDKNSD
DDESPGEPMPPGEELMPHLDEPVPPGEELLSPGEILSPGEIMSPEEELMPPGEELMPPGE
EIMPPGEEHI
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
cttccagcttctttagaggaaaaacatcactttccagcatcttcagaggaaataagacat
caccttccagcttctttagaggaaaaacatcactttccagcatcttcagaggaaataaga
catcaccttccagcttctttagaggaaaaacatcactttccagcatcttcagaggaaata
agacatcaccttccagcttctttagaggaaaaacatcactttccagcatcttcagaggaa
ataagacatcaccttccagcttctttagaggaaaaacatcaccttccagcatcttcagag
gaaataagacatcaccttccagcttctttagaggaaaaacatcaccttccagcatcttca
gaggaaataagacatcaccttccagcttctttagaggaaaaacatcaccttccagcatct
tttgaggaaagaagatatcacccttcaacatctcaagatgaaagaagatatcacccttca
acatttcaagatgaaagaagatttcagccttcaacatctgaagatgaaagaagatttcag
tcttcgtcatctcaggatgaaagaagatttcagtcttcgccatctaaggatgaaagaaga
tttcactctacgccatctaaggatgaaagatttcactctacgccatctaaggatgaaaga
agatttcagtcttcgccatctaaggatgaaagaagatttcactctacgccatctaaggat
gaaagaagatttcagtctgcgccatctaaggatgaaagaagatttcagtcttcgccatct
aaggatgaaagaagatttcagtcttcgccatctaaggatgaaagaagatttcagtcttcg
ccatctaagggtgaaagaagatttcagtcttcgccatctaaggatgaaagaagatttcag
tcttcgccatctaaggatgaaagaagatttcagtcttcgccatctaaggatgaaagaaga
tttcagtcttcgccatctaaggatgaaagaagatttcagtcttcgccatctaaggatgaa
agaagatttcggtcttcgccatctaaggatgaaagaagatttcggccttcgccatctaag
gatgaaagaagatttcgtccttcgccatctaaggatgaaagaagatttcgtccttcgcca
tctaaggatgaaagaagatttcagccttcgccatctcaggatgaaagaagatttcggcct
tcgccatctaaggatgaaagaagatttcagccttcgccatctcaggatgaaagaagattt
cagccttcgccatcccaggatgaaagaaataagccttcaatatctgaagatgaaagaaaa
tataaaccttcaacatctcgatctagaacaagtgcagattatgcactggatctgcaatat
tttctgaaaaaaagagcagaaagtgatgatactagtcataaaccaagaaagaaggtgata
gatattcgcctcagtacggctgctcaattttttgaggaagaggagacagtggaagaaaca
gtgactaccgaaagaattgccaaacttttaagaaatgcatcgttagatgtagatgtgcaa
agtaaactaaaaactttgcaacttgtacagaaattaattatacaaaaagaacccaaactt
cttgataattttttagatgaggttgttagttttcagcatgataaaagtcctgaaattcgt
atatttgttctgaaattcattgaagatgcttgtaaatttgatattcaaattcttcctaaa
atagtggggaacatgaaaattttgctagatgataccacgatatttgttaagaaaaaagtt
atccaaacaacagctaaattatacatccttaccattaaatggttttgttcagccaaaagt
gttgacgaagttatggaagcaacatgggcatgcatggctcaactgaaacgtaatatattt
gctctacttgaatctgacaatgaaggaattcgcgctttggttgtgaaattcatggaacgc
atagttatcattcaaactttcagagaccaatattcccaagatgaattatcgttagataag
attcctgtcatactcaacatttttagacctcggaaaatggaagaagaagcaaaggtcatt
tttcaacgtattgtagatcttcattgcgcttcgcatgtttcaagttttaacttaatgact
tgcatgcaagttttaactaccattacaagaaaaaggtttgaattttttccaaaagttttg
caagcatttgaatcgttgcatgcaaatttaccacctactctgagtcagtctcaagtaagt
agtgtgcgcaaaagtttaaaattgcagttatttattctagtgaaacatcctggagctgta
gaatttcactctcgtatttcaattatgttatctgatttgggcgcatcaccacaacaaatc
aataaatgttttccttctgtcgagaatactaagaaacgtgctttttcgagagattttgat
cgagattgggttaaaagatctaaacttggcgatgaattctttaatacaaaagcatctggt
tcttcatctagatctggatctatgaaaaacaaagctaaagatacggcaattgatataact
gctcaagatttagtgccaaaacttacacccataaatgttgccgatttggttcttgtaagt
atgttaagtctgacacctcatcttcctactcactttcggtcaacctatactcctattgct
gctgctggtactgaaccgcaagttaagcatttatcacgccttttagctacacagctgacc
attgctggtcttggcaaaggtgcagaagaaatgaaaatgcaagctcataatgcaaaattg
gatttgagcgatgacgatgatgaatttgcatctaaacaaattcaaacagttgttggtcag
actgtagatcccaggcctaagaagcagggtcttgttttgatgcctagtggtggacctcct
accaaaagtaataaatattcaaaaaagttggacttcgcatctgtggctaagccatttaca
gacgaagaatctgacaggttaagtcgcgcagctttcaatcgaattttaaatgctgaaaaa
gccattgcaaagagaggtactgcgtgtatgcgaacaaaaattctgacttctttagctact
cagttcagaggtgatttcgctacggatttgaagaatcatattttagaaaaccctcgtagt
cgcttagaattagctttcagttggatttatcaagagtattcttcttataaaggatttgaa
agttctacggaaagacccgtcgagttttatgaagagacaatagataaacttgtaggtgga
atattgaaaaccgacgatccaaatcgacttgcatttagtcgattttttgtcgaacctcct
tttattacttcaggtatggcggaatgtcttaagaaaatatgtatcgatgaagcagttaca
gaaattgggattcagctagctaaaaacatgactattagaagaccaacaaaaaaactattg
tttttaggagtaatatgtgatctcactcttcatgaaaaagttcatattcgctccaaagct
gtatctgcagctgttgaagtctacgaaaatgggagcatgagatcattcattgaagctttt
gcattaaggagtttaaagtttttgcttcatgacgctccatcaccctcacaattcatatat
tttactcaaccccctcgtgcatggtctgaagaattaacaaaattatgcttacaattatat
ttagctgtactccctatgaatcataagttaattcatgatcttggaactgtttatgtagag
acttcagctgatattaaacgaacgattcttcgagccttggaaactccatttaaaggaatg
agtatggaatctccagagcttcttcgttttgttgagaaatgtccaaaaggggcagagaca
atagtaacaagaataattcatattctaactgataaggctcctccttctgctgaacttgtt
tctcgtgttcgtgatttatatcggaaacgagtacctgatgtgcgttttctcattccaatc
attaatggacttacaaaagcggaagttatagcagcattacctgaactaataaaattgaat
ccaactgttgtgaaggaagttttccatcgccttttgggaagtagttttcctagtcctgtc
accccttctgaacttttggtcgccctgcataaaattgaaccagagaaatgtaatttaaaa
atagtaattaaagctacttcattgtgtttggaagaaaagcaagtatacactcaagttgtt
cttgccatggttctgcaagagctaatggagataaatccgcttcctatattgtttatgagg
acagttatacagtctcttacaaatcatccacatcttttaggtttcgtgactaatatcttg
cagcgtcttattttaaagcaagtttggaatgaaaggagaatatgggaaggtttcattaaa
tgctgccaacgtactaaaccacaatcatttcaagtacttttgcaattacctggtccacaa
ttacaagaagctcttgattcttgccctgatttacgtgatccgctatgtcactttgtgcga
tctttcactgatcaccagaaaagtcatgttaccaaagaagtgcgagcagttcttgaaggt
ttcagaattgaaatgggtctaaaagatgagtcagattccatttcagataagaattctgac
gatgatgaatcaccaggtgagcctatgccacctggagaggaacttatgccacatctagat
gagcctgtgccacctggagaggaacttttgtcgcctggagagattttgtcacctggagaa
attatgtctcctgaagaggagcttatgccacctggtgaggagcttatgccacctggagag
gaaattatgccacctggagaggagcacatatag
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integrated database retrieval system