Argiope bruennichi (wasp spider): 129963058
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Entry
129963058 CDS
T09870
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru04512
ECM-receptor interaction
abru04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129963058
04518 Integrin signaling
129963058
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
abru00536
]
129963058
Glycosaminoglycan binding proteins [BR:
abru00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129963058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
FnI_RECK
CFC
Motif
Other DBs
NCBI-GeneID:
129963058
NCBI-ProteinID:
XP_055933058
LinkDB
All DBs
Position
3:complement(34822567..34888642)
Genome browser
AA seq
1484 aa
AA seq
DB search
MRAPLGSLCAFLVWIVLAKAQDYNTEAYDDTACEYDDEIYENGEEWSPDSCTTCKCVLGN
TICDTEECPDIECKTQKYIPLGKCCPICVEDDEAQQPEETVLPPEPQPPSEVPREPLEPS
YPLVPIPGRRGEPGEPGTPGSPGERGESGEPGSHGVPGRPGPPGPAGDLSAWFQSLAAQQ
GLGGDKGPGPGLGPDAFQFMQAQVGPVGPRGSPGPPGPSGPQGFQGPRGESGEPGPPGTP
GPPGERGLPGLPGKDGESGEDGRPGPPGPPGPPGPRGLPGMPGLPGVKGHRGFPGLDGSK
GEQGPQGEKGAQGPAGKMGAAGPLGPPGPRGERGREGPPGPPGIRGIDGLPGPPGPPGPI
GRPGSPGFPGSPGAKGDAGPTGPKGSQGLQGPRGEPGKPGIPGEPGPMGAPGKDGAPGEK
GSPGETGLAGSPGFPGARGPPGLSGSPGLPGPKGSPGIPGEVGLKGESGRKGEQGTPGPR
GLPGTPGQAGKRGKAGSTGPPGPSGPPGERGLPGDRGFPGPDGPAGMKGAQGDRGPQGPQ
GPKGSQGESGRPGPPGLQGLRGLAGRPGLPGKDGIAGERGQPGADGKPGEPGPQGIQGLP
GLVGLPGSKGDQGEAGQDGLPGPAGPPGPRGDSGKEGSPGAPGPAGPPGESGERGPPGPE
GARGFQGLPGIAGNPGQPGKDGEPGLPGAAGPPGPAGERGERGFPGERGPQGTQGQPGPR
GEAGPPGADGPRGPAGEKGSKGHSGPSGLLGLPGSRGEPGPRGAKGDRGDHGPPGPEGPP
GRPGEQGLQGPVGSAGPPGESGEKGETGPPGPDGQPGSPGQPGDRGAPGPPGQQGFPGPV
GLAGSPGLKGGRGLPGPKGDQGNVGSPGSPGEAGPQGSPGLRGPKGPRGEEGKKGDAGFP
GPPGRPGEPGQPGAPGNPGPAGPPGITGIKGGPGDTGKPGSPGPSGNPGQPGFPGPKGEA
GSEGSPGLTGPPGPPGPAGDRGLPGVPGIQGRPGPPGPRGSPGDRGMTGKSGADGPPGPQ
GLQGPPGPPGPHGEQGPPGHSGKEGQPGISGRPGDKGPPGPHGPPGPPGLQGTQGPPGAL
GPAGPVGERGERGETGPRGVPGPQGPRGAPGAIGPTGMKGDRGDQGEQGMKGHRGLIGLQ
GLPGQPGVPGDKGPPGPPGVPGMEGPPGPKGPPGRDGSQGNPGLIGPVGPRGHTGDSGKP
GPLGPPGPPGPPGPPGEPFGYEASALAALFSQGQMKGPDPALGDEPDKLFSADTPIEEKK
RLVFEFYDKLIQEYEEFRKPSGEKQTPATTCRDLFVAHPELPSGNYWVDPNQGDPKDAIQ
VFCDKDTKATCVSAKPEQIQKKNYYVGKPQETWFSSMNGGFTFSYRADRIQMSFLQLLSK
NAEQNVTVHCRNLMVYKNNKVNNLKKAVKLMGYNDLEMSADGNPMFAFTAMSDTCQYRDN
QRGETTLKYETDKPQRLPIVDIAFRDIGSRNQEFGVDLGPVCFS
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgagggcccctctgggttctctgtgcgcgttcctcgtgtggatcgtattagccaaagcg
caggactataatactgaagcttatgacgacactgcttgtgaatatgacgatgagatctac
gagaatggtgaagagtggagtcctgattcgtgtacgacgtgtaaatgtgtgctgggcaat
acgatttgtgacacggaagaatgccctgacatagaatgcaagactcaaaagtacattccc
cttggaaagtgttgtcccatttgtgtggaagatgatgaggctcaacaacccgaagaaaca
gtactacctccagagccgcagccgccttctgaagtacctagagaacctttagaacctagt
tatccacttgtgccaatacctggtcgaaggggcgaacctggtgagcctggaacgcctgga
tcacctggagagcggggtgaatcaggagaacctggatcacatggtgtacctggaagacct
ggaccacccggtccagccggagatttaagcgcttggtttcaaagtttggctgctcaacaa
ggccttggaggagataaaggtcccggccctggtctaggtcctgatgcttttcagtttatg
caagcgcaagtcggacctgtgggaccaagaggatctcctggaccacccggaccatcaggt
ccacaaggttttcaaggccctcgaggagaatctggagaacctggcccacctggcacacct
ggtccaccaggagaaagaggacttcctggattacccggaaaggatggagaatctggcgaa
gatggtagacctggacctccaggaccaccaggacctccgggtcctcgtggtcttcccgga
atgcctggattacctggtgtgaaaggacatagaggcttccctggtttggatggatcaaaa
ggtgaacaaggacctcaaggagaaaagggcgcccaaggaccggccggaaaaatgggtgca
gctggcccattgggaccgcctggacctcgaggagaaagaggacgcgaaggccctcctgga
ccacctggaataagaggaatagatggcttgcccggaccgccaggaccaccaggtcctatc
ggcagaccaggatccccaggtttcccaggatcacctggagcaaagggagatgctggaccc
acaggccctaaaggaagtcaaggcttacaaggaccacgtggagaacctggtaaaccagga
atacccggagaaccagggccaatgggtgcaccaggaaaagatggcgctccaggagaaaaa
ggttcgccgggtgaaactggtctagcagggtcacctggtttccctggtgcaagaggtccg
cctggcttatcaggaagtccaggactaccaggcccgaaaggatctcctggtatccctggt
gaagttggtctgaaaggagaatctggaagaaagggagaacaaggtacacctggtcccaga
ggtcttcctggaacacctggtcaagcagggaaaaggggcaaagctggttcaactggtcca
cctggaccgtccggccctcctggtgagcggggcttacctggagatcgtggattccccggc
ccagatggccctgctgggatgaaaggggctcaaggtgacagaggcccgcaaggtcctcag
ggtcccaaaggctctcagggtgaatctggaagacctggcccaccaggattacaaggactt
cgcggtttagctggaagacctggattacccggaaaagatggaatagctggtgaaaggggc
caacctggtgcagatggaaaaccaggtgaacctggaccacaaggaattcaaggattaccc
ggattagttggattaccaggatcaaaaggagatcagggtgaagctggacaagatggttta
cctggccccgctggtcctccgggacctagaggagactctggaaaggaaggatcaccgggc
gctcccggacctgccggacctcctggagaaagtggcgaacgaggacctcctggaccagag
ggtgccagaggatttcaaggcctacctggtattgctggaaatcctggtcagcctggcaaa
gatggtgaacctggtcttcctggagctgctggacctcccggacctgcaggagaacgtggt
gagaggggattccctggtgaaagaggaccacaaggaactcaaggtcaaccaggaccgaga
ggagaggctggtccacctggtgcagatggtcctaggggtcctgctggtgaaaaaggttct
aaaggtcattctggtcctagtgggctgttgggattaccaggatctagaggtgagcctggc
ccccgaggagcgaagggggatcgaggagatcacggtcctcctggacctgaaggtcccccg
ggccgtcctggtgaacaaggactccagggacctgtaggatccgctggaccccctggtgaa
tctggggaaaagggtgaaacgggtccacctggtccagacggacaacctggttctcctgga
caaccaggagacagaggagcacctggcccaccaggacaacaaggattcccaggaccagtt
ggattagctggctccccaggacttaaaggtggaagaggacttccgggaccaaagggtgac
caaggcaatgtaggctcccctggatctcctggagaagccggacctcaaggatcgcctggt
ctgagaggacctaaaggaccaagaggagaagagggcaaaaaaggagatgctggattccct
ggcccccctggtcgccctggtgaacctggtcaaccgggtgctcctggcaatcctggacca
gctggccctcctggtattactggaataaagggtggacctggagatactggaaaaccagga
tcccctggaccttcaggaaatcctggacagcctggtttccccggaccaaaaggagaagct
ggatcggaaggatcgcccggtctcactggaccacctggaccaccaggccctgctggagat
cgtggattacctggtgtccctggtatacaaggaagacctggtccaccagggccacgtgga
tcaccgggggatagaggaatgacaggtaaaagtggtgctgatggacctcccggacctcaa
ggattacaaggaccaccaggacctcctggaccacatggtgaacaaggacctcctggccat
tcgggtaaagaaggtcaaccaggtatttctggaagaccaggtgacaaaggaccaccaggg
cctcatggacctcccggcccaccaggtcttcaaggaactcaaggtcctccaggagctctt
ggacctgctggccctgtaggagaaagaggagaacgaggcgaaactggaccaagaggagtg
cctggacctcaaggacccagaggtgcacctggagcaattggaccgactggcatgaaaggg
gatagaggtgatcagggtgaacagggaatgaaaggtcatcgtggtctaattggtctacaa
ggtttgcctggacagccgggtgttcctggagataagggaccccctgggccacctggtgtt
cctggtatggagggtccacctggacctaaaggccctcctggaagagatggcagccaagga
aaccctggtttaatcggacctgtaggacctagaggacatactggagattcaggcaaacct
ggtcccttaggaccaccaggtccacctggacctcctggaccccccggagaaccatttgga
tatgaagctagtgctttagctgctttgtttagccaaggtcaaatgaaaggtcccgatcca
gctcttggagatgaaccagacaagctattctcggcagacacacctattgaagaaaagaaa
aggctggtgttcgaattttatgacaagctcatccaggagtacgaggagttccgcaaaccg
tctggagagaaacaaaccccagcgaccacctgccgagatctctttgtcgctcacccagaa
ctacccagcggtaattactgggttgaccccaaccaaggagatcctaaagatgccatccaa
gtattttgtgataaagatactaaagctacttgtgtgtctgctaagcctgaacagatccag
aaaaagaactactatgtcggtaagcctcaagagacctggttcagctcaatgaacggcggt
tttactttcagttatagggcagatcgcatccaaatgagcttccttcaacttctgagcaag
aacgccgagcaaaacgtcaccgtccactgccgaaatctcatggtctacaagaacaataaa
gtgaacaatctgaagaaggccgtcaaactgatgggttacaatgacttggagatgtctgca
gatggaaaccccatgtttgcatttacagcaatgtcagatacctgtcagtatcgtgacaac
cagaggggcgagacaactctaaaatacgaaacggataaaccgcagagattgccaatagtg
gacatcgccttcagagatattggttccagaaatcaagaatttggagtagacttgggacct
gtgtgcttttcttaa
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