Argiope bruennichi (wasp spider): 129966376
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Entry
129966376 CDS
T09870
Name
(RefSeq) NPC intracellular cholesterol transporter 1-like
KO
K12385
Niemann-Pick C1 protein
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
abru04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
129966376
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129966376
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abru02000
]
129966376
Transporters [BR:
abru02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
129966376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
Sterol-sensing
NPC1_N
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
129966376
NCBI-ProteinID:
XP_055936773
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Position
4:106467816..106536859
Genome browser
AA seq
1298 aa
AA seq
DB search
MKLIFLTSIFITLFSETLLEILPKEYDHCVCNVSQGLDTIVVYVTNGPPEPLDKEVLLDD
EVTAGQFLEKLCPEYAYDENPRVCCSLTHLRELHKTIDLLEALGFSRCPSCFQNLLQLLC
TSNCAPYQNQFMQVTETAFIDDGDHKSEIIKSLNIHVSKLYAYKTYESCSEVQGLFPGSL
LYDLLCGAWGSSQCTTERLLEQLGKPVTEGGKTYARTSFKLHVEEKVVVNGRTFFPVKTP
YFKCSEAPGPNLSACNCYDCKASCAAKALEPPVFPEEGKSFSVFQIDGFIFCAILGFGLF
STCVTVIFCCLSHPCFKRPLSKTKNDKKSSFEKSFYSPSKTFGNWFEERLETAFMHWAIF
VSKYPVLIVMLSLFICSICSLGLVFNSVITTDPVELWVFPNSEARRDMEDYNKHFGSFYR
VEQIIITPTNRETFYHPIIVNHELKNISWGPVFQQDFLLAAFKLQEQVENLTATLDGTPI
HLKDICLAPLKPLNTECAIQSLFGYFQNKIERFYNKTDYLFHFKRCSLADKTIACFAPYG
GPIDDMSLVLSGFHETFDSAEALSITFPLLNYNEESKNVKARMWESELVDFLKNYSHPLM
NISFMTERSLEDEYIRGSQSDILLISISYLLMFCYIVITLGDYHRCKTFLLGSKFCLGSA
GVLIVLISVISTLGLLCFLGIPSTFIVLEAVPFLVLAVGVDNIFILVQAYQRGEKKPDQS
LEEYIGLVVGKVAPSILLSSVSMSSCFFIGALMKSPAVCLFAFYAGVAILVNFLLQMTCF
LAIFILDCRREEKRKLDFCCCFTISEVNDAKKCHSKNGVIHRMMQKIYIPLLMKNYVRYF
VMIFFGIWLCSSIAVINKIEVGLEAELTFPNDSYLVNYLQDIKKYSSIGHPVYFGITGEY
NYTDVNAQKKICSAQSFCESNSITSEIGRMAKVKNRTYIALQPISWLDNYFEYLQSESCC
YEFKSNRTHCPSYIANQFKGLCRSCRTKNPSSLSEAEFIRRLQFFLSDISWERCPKAGNA
MFGTAIDISPSKNSTKIKATSFKTYHTALKTSKDFYEALAWSRKIAANLTNILRNGSENS
DVRVFPYSFPHVFYEQFLTQWPDTLRSLSLSIIAVFLTTFLLLGLDFHSAVMITVTVITI
VINIMGLMYWWSITLNAVSLVNLIVAVGISVEFCSHLTRCFALSEKPTRIERAQDALYQM
GTSVLTGITLTDCGILVLAFAKSQVFRIFYFRMFLGIIAFGTLHGLVFLPVFLSLFGPSS
RQKKVKKSFINPPSFDEREAEMPLTNGDHKDNIQLSNM
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgattttcttaacgagtattttcatcactttgttttctgaaactttattggag
atcttacctaaagaatatgatcactgtgtttgcaatgttagccaaggtttggatacaatt
gtagtctatgtcaccaacggcccaccagaaccactggacaaggaagtacttcttgatgac
gaagtaactgctggtcaatttcttgaaaaattatgcccagaatatgcttatgatgaaaac
cctcgtgtttgttgctctctgacacatctgcgtgaacttcacaaaactattgacttattg
gaagcgctagggttctctcgttgcccatcatgctttcaaaatcttctccaattactttgc
acctcgaattgtgcaccctatcagaaccaattcatgcaagtcaccgagacagccttcatt
gatgatggcgaccacaaatcagaaataatcaaatctttgaatatacatgtatctaaatta
tatgcttataaaacatacgagtcatgcagtgaagtacaaggcctctttcccggctctctt
ttatacgacttgttgtgtggcgcttggggtagctctcaatgcaccactgaacgactactg
gagcagctgggaaaacctgtaactgaaggtggtaaaacctatgctaggacttccttcaaa
cttcacgttgaggagaaagtagttgttaatggacgcacatttttccctgtcaaaacacca
tattttaaatgttcagaggctcccggtccaaatctgagtgcttgcaattgctatgattgc
aaagcatcatgtgctgctaaagctttagagcctcccgttttccctgaagaaggaaaatca
ttcagcgtatttcaaatagatggctttatcttttgtgcaatattgggttttggtttattt
tctacatgcgtcacagtgatattctgctgtcttagccatccttgtttcaaacgtccactt
tcaaagactaaaaatgacaaaaaatcatcatttgaaaaatctttctatagtccttccaag
acatttggaaactggtttgaagaacgattagagacagcttttatgcattgggctattttt
gtttctaaatatccagtacttatcgtgatgttatctctttttatttgtagcatctgttca
ttaggtttggttttcaattccgtcatcaccacggatccagtcgaactttgggtattccca
aacagtgaggctcgaagagatatggaagattataataaacattttggatctttttataga
gttgaacaaatcattataactccaacaaatcgagagacattttatcatcctattatagta
aaccacgaattaaagaacatttcttgggggcctgtgtttcaacaagattttctattggca
gcttttaaactgcaagagcaggttgaaaatttaactgcaacactcgatggcactcctata
catctgaaagacatatgtctagcacctttgaagcctctgaatacggaatgtgctatacaa
agtcttttcggatactttcaaaataaaattgaacgtttctataataagacggattattta
ttccattttaaacgctgctcattggcagataaaactattgcctgtttcgctccctatgga
ggacccattgatgacatgtctctagtgctcagtggattccatgagacattcgattcggct
gaagcactgtctatcactttccctcttctcaactataatgaagagagcaaaaatgtaaag
gcccgaatgtgggaatcggaattagtggattttttgaaaaattattctcatcctttaatg
aatataagctttatgactgagagatccctagaagatgaatatattagaggaagtcagtct
gatattttgctgataagtataagttatctcctgatgttctgttacattgtcatcacgctt
ggagattatcataggtgtaaaacatttttgttgggatccaaattttgtctgggttccgct
ggagttctcattgtgctcatctctgttatctccactctcggtctgctttgcttcctcgga
attccttctacgtttattgttttagaggctgtaccattcctggtattagctgtgggagta
gataacatatttatactggtgcaggcctatcagagaggagaaaagaaacctgatcaatca
ctagaagaatatattggattggttgtaggaaaagttgctccaagtatactattatcgagc
gtttcaatgtcaagttgcttttttattggtgcattgatgaaatcgccagcggtctgctta
tttgcattttatgctggggtggcgatactagtgaatttcttgttgcaaatgacatgcttt
ttggcaatttttattttagactgcagaagagaagagaaacgcaaattagatttctgttgc
tgctttacaatttcagaggtcaatgatgctaagaaatgccattcgaaaaatggagtaata
cataggatgatgcaaaaaatatacattcctctccttatgaaaaattatgttagatatttt
gtgatgatatttttcggaatctggctttgttcatctattgcagttataaataaaattgaa
gttggattggaggctgaactcacatttccaaatgattcttacctagtgaattacttacaa
gatatcaaaaagtattcttccattggacatcctgtttattttggtatcactggtgaatat
aattatactgatgtgaatgctcagaagaaaatttgctctgctcaaagcttttgtgaatcc
aattctatcacttctgagattggaagaatggctaaagtgaaaaacaggacatacattgcc
ttacaacccatttcttggttggacaattattttgaatatttacaatcggaatcgtgttgc
tatgagtttaaaagtaaccgaacacattgtccttcttacatcgccaatcagtttaaaggc
ctgtgtcgatcttgccgaacgaaaaatccatccagtttatcagaagcagaatttattaga
agacttcagttctttttatcagatatttcttgggagagatgtccaaaggcgggtaacgcc
atgttcggtactgcaatcgacatttctccttcaaaaaattcgacgaaaataaaagctacc
agtttcaaaacttatcacactgccttgaaaacatcaaaagatttttatgaagctctagct
tggtcgaggaaaattgcggcaaacttaaccaacattttaagaaatggcagcgaaaattca
gatgttcgggtttttccttatagtttcccccacgtattctatgaacaattcttgactcag
tggccggacaccctaagaagtctgagtttatcaataattgcagtattcttaacaactttc
ctactgctagggctggattttcattcagctgttatgattacggtgacagttataacaatt
gtaatcaatatcatgggtctcatgtactggtggagcatcactttgaatgctgtatcactg
gtaaatctgattgtggcagtgggaatatctgttgaattttgctcccatctaacacgatgt
tttgctttaagtgagaagccaactcgtatcgaaagagctcaagatgctttgtatcaaatg
ggaacatcagtattaactggaataacattaacagactgtggtattcttgtcctcgcattc
gctaaatctcaagtatttcgaatattctattttcgtatgtttcttggcatcatagccttt
ggcactcttcacggactggtgttcctgcccgtgtttttaagtctcttcggcccatcctca
cgacagaaaaaagttaaaaaatccttcatcaatccaccctcctttgatgaaagagaagct
gaaatgccacttacaaatggagaccataaagataatatacaattatcaaatatgtga
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integrated database retrieval system
