Argiope bruennichi (wasp spider): 129968757
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Entry
129968757 CDS
T09870
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03440
Homologous recombination
abru03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129968757
03450 Non-homologous end-joining
129968757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abru03032
]
129968757
03400 DNA repair and recombination proteins [BR:
abru03400
]
129968757
DNA replication proteins [BR:
abru03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
129968757
DNA repair and recombination proteins [BR:
abru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
129968757
BRCA1-C complex
129968757
NHEJ (non-homologous end-joining)
MRX complex
129968757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_15
SbcC_Walker_B
AAA_21
Crescentin
ABC_tran
AAA_29
TPR_MLP1_2
AAA_13
AAA_16
Motif
Other DBs
NCBI-GeneID:
129968757
NCBI-ProteinID:
XP_055938955
LinkDB
All DBs
Position
5:114743475..114791543
Genome browser
AA seq
1314 aa
AA seq
DB search
MSMIEKMSITGIRSFGPDDRQVIEFFRPLTLILGPNGCGKTTLIECLRYVTTGDMPPNSD
RGGSFVHDPKFAGEQEVKAQVKLQFKDVLGKKVVVTRSLMVTQSVKKLTLKTLEGTVKRY
GPHGEKTELSTRCAEIDAEMIGFLGVSKAILNHVIFCHQEESNWPLSEGKALKQRFDEIF
AATRYIKALEEIRKKRNEMTGEIKIYQTQVDSLVNNKRKAEEFQRDLESNESRLSACRDS
IQELERKLQPISEKLLDIKAKQDKIGNLQGQLDKSLELIKKYEKDERDLRKSIGDSLFEG
SKEDLEEEMQNFNAFVSQKRKKLEKLQQEMSNLQKKYQNDQKLKAKLLEELGKLKSENER
FKQNVSLRDSKLRVLRKKLGLGDLGFDEDEPLEDSQVQNVMRNLRQRNSATQSEFQNCKL
KHESNENRLQNLIQSTCMEKAQKQMQLSNNNQQMAKNKTTLRNINDELNRLDSLANLQDT
VEKELQEHEEELKNVENSINVDDLRQNLSSKQRKREEYEQQLTALNQEMNTLQKESKIRH
EIDLVNKDINTKQEAIDKVNSRNKDTLLHLLGQLPEQGVCDKVTTLVNNLNKKVDELNKS
LEKERSNLSSLKTTEKFHSNQLAAKKELLVSNQNKIFDVCGSQNFEYSCDTLKTTIKGLQ
DEKGALTGSLYLFNKYIEKLKKPRPCCPLCSRSFQQVNEAQALISELQKKLQTVPSALEE
KTKLITEKEKLLNKMVELKPVKEAISTLLEKEIPELEHKLEAATEDISKSSAKISETEEV
LDNICSDMKTASALLPDLYLLDQNQNEMKALERRLSKLKMQIGGKDISRNFQQVTEEQNA
LQTQIKILNRDIEKIQQKINNHIEEVQQLKGRINDLKSEKNKMCSDMQKKSTLIEQSENI
TKENAGLVEATKEIKAEIAKLEVKIKELNKEKENATKSKESELEKLTTKIREEERETESI
EKISHEIEQYVLANKEAELVEHEERIEKITSQIESKREELSSMSKTEKELHQDINSQELK
FRNLEDNRKLIEIIELISQMNSECQKLKDKIGGYDIRSLHSDLERLNQEAKRITRERDEA
SIRETEFKVKIRECRKQLQDEMFKDAEKKHKDKCIELRTTQLACDDLNKYYVALNKAIMN
YHQLKMKEINKIIKDLWIRTYAGNDIDYIEIQSDEDGDRGIEKTRRTFNYRVVMFKGDTP
TDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENISKLARALVDIVQ
SRSEQRNFQLIIITHDEDFIELLGRSETVDYFYKVSKDNNAHSKISKLYISDIP
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgattgagaagatgtctataacaggcatccggagttttgggccagatgatcgt
caggtgattgagtttttccgacctcttacattgatccttggaccaaatggctgtggtaaa
acgactttaattgaatgtttgcgttatgtgactactggtgatatgcctcctaatagtgat
agaggtggatcatttgttcatgatcctaaatttgccggtgaacaggaagtaaaggctcag
gtcaaattacaatttaaggatgttctgggtaagaaagtcgttgtcacaagatccttaatg
gtgacacaatccgtgaaaaaattgactttgaaaactctagaaggcactgtaaaacgttat
ggtcctcatggtgaaaaaactgaattaagtacaagatgtgcagaaattgatgcagaaatg
attgggtttctaggagtttccaaagcaattttgaatcatgtcattttttgccatcaagag
gaatccaattggcctctgagtgaagggaaagctttaaaacaaaggtttgatgagatattt
gctgccacccgttacataaaagcattagaagagattcgtaagaaaagaaatgaaatgaca
ggtgaaattaaaatatatcaaacacaagttgattcattggtaaataataaaagaaaagca
gaagaatttcaaagagatttggaatccaatgaatcacgtctttctgcatgtagagactcc
atccaagaacttgagagaaaacttcagcctatttctgaaaagttactggatatcaaagct
aaacaagataagataggaaacttacaagggcaacttgataaaagtttggaacttataaag
aagtatgaaaaagatgaaagagatttgagaaaatctattggagatagtttatttgaagga
tctaaagaagatcttgaggaagaaatgcagaatttcaatgcttttgtatctcagaagagg
aaaaagcttgaaaagcttcagcaagaaatgtcaaatcttcaaaagaagtaccaaaatgat
caaaaactcaaggctaaacttttagaagaattgggtaaactgaaatcagaaaatgagcgc
ttcaagcaaaatgtatctctccgagattctaaacttagagttttgcgtaagaaattgggc
ttgggagatcttggttttgatgaagatgaacctcttgaagattctcaagttcaaaatgta
atgaggaatttaaggcaacgcaacagtgccacacaaagtgaatttcaaaattgcaagctc
aaacatgagtcaaatgagaatcgtcttcaaaatttaatccaatctacatgtatggagaaa
gctcaaaagcaaatgcagttgtctaacaataatcaacaaatggctaagaataaaacaact
ttgcgcaatattaatgatgaattaaatcgtctggattcattagcaaatcttcaagatact
gttgaaaaagaacttcaggaacatgaagaagaattgaaaaatgtagaaaattctatcaat
gttgatgatcttcgtcaaaatttatcatcaaagcaacgaaagagagaagaatatgaacaa
caactaacagcattaaaccaggagatgaatactcttcaaaaagaaagtaaaatacgccat
gaaattgatttagtaaataaagatattaataccaaacaagaagccattgataaagtgaat
tctcgaaacaaagatacacttttacatcttcttggtcaactaccagaacagggtgtttgt
gataaagttaccacattagtgaacaatttaaataaaaaagttgatgagttgaataaaagt
ctagagaaggagcgctctaatttatcttctctgaaaacaacagagaaatttcactcgaat
caacttgcagctaagaaagaactacttgtctccaatcagaacaaaatatttgatgtttgt
ggtagtcaaaattttgaatatagttgtgatactttaaaaacaaccattaagggtctacaa
gatgagaaaggagctttgactggaagtttgtacctcttcaacaagtacattgaaaaacta
aagaaaccaaggccttgttgtcctttatgtagtaggtccttccaacaagtaaatgaagct
caagctctaataagtgaactgcaaaagaagctacaaactgtccctagtgctctagaagaa
aaaacaaagttgattacagagaaagaaaaattgttgaataagatggtggaattgaaacct
gtgaaggaagcaatttcaactctattagaaaaagagattcctgaattagagcataaatta
gaggcagctacagaggacatatcaaaatcatctgccaaaatttctgagacggaagaagta
ctggataatatttgtagtgatatgaaaacagcttcagctcttttaccagatttatatctg
cttgaccaaaaccagaatgagatgaaagcattagaaagacgcctttccaaattgaagatg
caaattggtggaaaagacatttctagaaattttcaacaagtgactgaggaacagaatgct
ctgcagactcaaataaaaatattaaaccgtgacattgaaaagattcaacagaaaattaat
aaccatattgaagaagtgcaacagctgaaaggaagaatcaatgacctaaaatctgagaaa
aataaaatgtgcagtgacatgcaaaaaaaatctactcttatagaacagtctgaaaacata
acaaaagaaaatgcaggacttgttgaagctacaaaagaaataaaagctgaaattgcaaaa
ttagaggtaaagatcaaggaattgaataaagagaaagaaaatgccacaaagtccaaggaa
agtgaattggagaaattgaccacaaaaatcagggaagaagaacgagaaactgagagcatt
gaaaagatatcccatgaaatcgaacagtatgtcttagctaataaagaagcagaattagta
gaacatgaggaaagaattgaaaaaataacttctcaaattgaatccaagagggaagaatta
agcagcatgagcaaaacagaaaaagaactccaccaagacattaattctcaagagttaaaa
tttcgaaacttggaagataacagaaagcttattgaaatcattgagttgatcagccaaatg
aattctgaatgtcagaaattaaaagataaaattggtggttatgacatcagatctttacat
agtgacttagagcgtctgaatcaggaagcgaaaagaattacaagagaaagagatgaagca
agtatacgtgagacagagttcaaagtgaaaattagagaatgcaggaagcagcttcaagat
gagatgtttaaggatgctgagaagaagcataaagacaaatgcatagagttaaggaccact
caattggcttgtgatgatttgaacaagtattatgtagccctaaataaagccattatgaat
taccatcagttaaagatgaaagaaataaacaaaatcattaaagatttgtggataaggaca
tatgctggaaatgatattgattacattgagatacagtcagatgaagatggagaccgtgga
atagaaaagactcgaaggacttttaattatcgtgtggtgatgttcaaaggagatacaccc
actgacatgagagggcgatgcagtgctggtcaaaaggttttagcatcccttatcattcga
ttagccttagctgagactttctgtttaaactgtgggattttagcactagacgaacccact
acaaatcttgaccgtgaaaacatctcaaagcttgctcgagctcttgtggacattgtacaa
tcacgctcagagcagcgaaatttccagttgattattatcactcatgatgaagatttcatc
gaacttttaggtagatcagagacagtggactacttttacaaagtttcaaaagacaataat
gcccattccaagatatctaagctatacatatctgatattccatga
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