Argiope bruennichi (wasp spider): 129968778
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Entry
129968778 CDS
T09870
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03020
RNA polymerase
abru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129968778
09124 Replication and repair
03420 Nucleotide excision repair
129968778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abru03021
]
129968778
03400 DNA repair and recombination proteins [BR:
abru03400
]
129968778
Enzymes [BR:
abru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129968778
Transcription machinery [BR:
abru03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129968778
DNA repair and recombination proteins [BR:
abru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129968778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
AcetDehyd-dimer
Motif
Other DBs
NCBI-GeneID:
129968778
NCBI-ProteinID:
XP_055938997
LinkDB
All DBs
Position
5:114723658..114734703
Genome browser
AA seq
1923 aa
AA seq
DB search
MSMIVTSDSKATLRDVKRVQFGILSPDEIRRMSVTEGGVKYPEIYEGGRPKLGGLMDPRQ
GVIDKMSRCQTCAGNMATCPGHFGHIELAKPVFHVGFLKKSIKVLRCVCFYCSKLLVSPN
NPKIKEIIGKTKGQPRKRLAHVYDLCKGKNICEGGDEIDAKLGQENTMHDDGTKKSGHGG
CGRYQPSIRQSGLDLTAEWKHINEDSQERKIALSAERVWEIFKHISDEECNVLGMDPKYA
RPDWMLVTVLPVPPLPVRPAVVMFGSARNQDDLTHKLSDIVKANNELIRNEQSGAAAHII
AENIKMLQFHVATMVDNELPGLPRAMQKSGRPLKSIKQRLKSKEGRIRGNLMGKRVDFSA
RTVITPDPNLCIWEVGVPRSIAQNLTFPEIVTPFNIDKMHELVQRGNNQYPGAKYIVRDS
GERIDLRFHPKASDLHLQCGYRVERHVRNGDVIVFNRQPTLHKMSMMGHRIRVLPWSTFR
MNLSVTTPYNADFDGDEMNLHVPQSLETRAEVQELALVPRNIITPQSNKPVMGIVQDTLT
AVRKMTKRDVFLEKDQMMTLLMFLPIWDGKVPMPAILKPKPLWTGKQLFSLIIPGNVNLI
RTHSTHPDEEDDGPYKWISPGDTKVLIEHGELISGIVCKKTVGASSGSLMHVLFVELGHE
VAGAFYGHIQTVVNNWLLLEGHSIGIGDTIADPQTYIDIQNTIKKAKMDVIEVIEKAHND
DLEPTPGNTLRQTFENQVNRILNDARDKTGASAQKSLSEFNNFKAMVVSGAKGSKINISQ
VIACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGG
REGLIDTAVKTAETGYIQRRLIKAMESVMATYDGTVRNSTGQVIQFRYGEDGLEGTTVEF
QSLPTLKPSNKAFEKRFKFDATNERYLRRIFLEDVVREILGDPKAIGEFEKEWETLKAER
EVLRSIFPTGDSKVVLPCNLQRMIWNAQKIFHVNTRSATDLSPLRVMQGVEGLVKKLIIV
PGEDRLSIQANDNATILFRALLHSTLCTKRVAEEFRLSTEAFDWLLGEIETRFQQAQVQP
GEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVFL
TGAAARDAEKAKDVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFD
PSRISPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMN
NDDNKLQEEEEQVDKMEDDVFLRCIEANMLSDMTLQGIEAIAKVYMHLPTTDNKKRIVIT
ETGEFKSIAEWLLETDGTSLMRVLSEKDVDPVRTYSNDICEIFAVMGIEAVRKAIEKEMN
HVISFDGSYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDILLDAA
SHAELDPLKGVSENIIMGQLPRMGTGAFDLLLDAEKCKYGIEIPLAGAMGGPGVFFGSAA
SPTSGMSPQMTPWNQGTTPAYANAWSPGLGSGMTPGAAGFSPSAASDASGYSPGYSPAWS
PQPGSPASPASPYIPSPVGAMSPSYSPSSPSFAPTSPSLTPQSPSYSPTSPSYSPTSPSY
SPTSPNYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPSSPSYSPQSPSYSPGSPNYSLTSPKYSPTSPSYSPTSPSYSPGSP
QYTPTSPKYSPTSPTYSPTSPSYSPSSPKYSPSSPQYSPTSPSYTPTSPKYSPPSPQYSP
SSPKYSPTSPSYSPTSPQYSPTSPTYSVTSPKGSSYSPTSPGYSPSSPSYSPASPDDDED
SDK
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgatagtaacttcagactctaaagctaccttgcgggatgttaagcgagtccag
tttggtatattgagtccagatgaaatccgtcggatgtcagttactgaaggaggtgtcaaa
tatcctgaaatctatgaaggtggtcgaccaaagcttggtggtcttatggatccccgtcag
ggagttattgacaagatgtctcgctgccagacatgtgcagggaacatggcaacatgtcct
ggacatttcggacacatagaacttgccaaacctgtttttcatgttggctttttgaagaaa
agtattaaagttttgagatgtgtctgcttctactgttcaaaacttctggtatctccaaat
aaccccaaaatcaaagaaattattgggaagactaaaggtcagccaaggaaaagattagca
catgtgtatgatctttgcaaaggaaaaaatatttgtgaaggtggggatgaaattgatgca
aaactaggccaagaaaacactatgcatgatgatgggacaaaaaagtctggccatggtggt
tgtggacgttatcagccttctattcgtcagagtggtctggatctgactgctgaatggaag
cacattaatgaagattctcaagaaagaaaaattgcccttagtgcagaaagagtttgggaa
attttcaaacatatatcagatgaagaatgcaatgtacttgggatggatccaaagtatgca
agaccagattggatgttggtaactgtgttaccagttccacctctacctgttagacctgct
gtagttatgtttggatctgccagaaatcaggatgatcttactcataaactttcagatatt
gtcaaggctaataatgagttaattcgtaatgaacaaagtggggctgctgctcatataata
gcagaaaatattaaaatgctacaatttcatgtagcaacaatggtggataatgaattgcct
ggattaccaagagcaatgcaaaaaagtggcagacctttaaaatcaatcaagcagcgtttg
aaaagtaaagaaggccgtattcgtggtaatttgatgggaaagcgagttgatttttctgct
cgtactgtcattacacctgatcctaatctttgcatttgggaggttggagtgccaagatct
attgcacaaaatttgactttcccagaaattgtgactccctttaacatagataaaatgcat
gaattagtccaacgaggaaataaccaatatcctggtgcaaaatatattgttcgtgatagt
ggagaaagaatagacttgagatttcaccctaaagctagcgacctgcatttgcagtgtggt
tatagagtagagcgtcatgttagaaatggagacgtgattgtcttcaatcgacaacctacc
ttgcacaaaatgtctatgatggggcatcgtattagagttttgccctggtcaacatttcga
atgaatctgagtgtgacaacaccttacaatgctgattttgatggagatgaaatgaatttg
catgttccacaatcccttgaaactagagctgaagtccaagaattggctcttgtgccaaga
aacattataacaccacaatcaaacaaacctgttatgggtattgtgcaggatactttgact
gctgtgcgtaaaatgacaaagcgtgatgttttcttggaaaaggatcagatgatgactctt
ctaatgtttcttccaatttgggatggtaaagtaccaatgcctgcaatattaaagcctaag
cctttatggactgggaaacaattgttttctctcattattcctggaaatgtcaatttaatc
cgtactcatagtacacatccagatgaagaagatgatggaccttataaatggatatctcct
ggcgataccaaagtacttattgaacatggagagctcattagtggaattgtttgcaaaaaa
actgttggagcatctagtggttctttgatgcatgtattatttgttgaactgggtcatgaa
gttgctggtgcattttatggacatattcaaactgttgtcaataactggttgttactggag
gggcacagtattggtattggagacactattgctgatccacaaacttacattgacattcag
aatacaatcaaaaaggctaaaatggacgtgatagaagttattgaaaaagctcataatgat
gatttggaacctactcctggtaatacattgagacaaacttttgaaaaccaagtgaatcgt
atccttaatgatgccagagacaaaactggtgctagtgcccagaaatctttatctgaattt
aacaactttaaagctatggtggtgtctggggctaagggatcgaaaattaatatatctcaa
gttattgcttgtgtgggacaacagaatgttgagggtaaacgaataccttttggatttagg
aaacgtaccttgcctcattttatcaaggatgattatggtcctgaaagtagaggttttgta
gaaaattcataccttgctggcttgacaccctcagaatttttctttcatgctatgggaggc
agagaaggtcttattgatactgctgtcaaaactgctgaaactggttacattcagcgtcgt
ttgataaaagctatggaaagtgtaatggcaacttatgatggaactgttcgaaacagtaca
ggccaagttattcagttccgttatggagaagatggattagaaggaacaactgttgaattt
caatctttgcctacattgaaaccgtctaacaaggcatttgaaaaacgcttcaaatttgat
gccactaatgagagataccttcgtcgcatctttttagaagatgttgtgcgagaaatttta
ggtgatcctaaggctattggtgaatttgaaaaagaatgggaaacattaaaagctgaaaga
gaagttttacgaagcatatttcctacaggagacagcaaggtagttttaccatgcaatttg
cagagaatgatttggaatgctcaaaagattttccatgtaaatactagatcagcaacagat
ttaagtcctttgcgtgttatgcaaggtgttgaaggccttgtgaagaagttaatcattgtg
cctggagaagataggttgagtatacaggcaaatgacaatgctactattttattcagggct
cttctgcattcaactttatgcactaaaagagttgctgaagaattccgtttgtccactgaa
gcttttgattggctccttggagaaatcgaaacacgttttcaacaagctcaagtccagcct
ggagaaatggtgggtgccttagctgcacagtctttaggagagcctgccactcagatgaca
ttgaatactttccattatgctggtgtgtcagccaaaaatgtaacacttggtgtaccaaga
ttgaaggaaattattaacatatccaagaaacctaaaacaccttcccttactgtatttctc
actggtgctgctgccagggatgctgaaaaggcaaaggatgtactttgtcgtctggaacat
actacactaagaaaagtcactgcaaatactgctatttattatgatccagatcctcagaat
actgtcattgctgaagatcaagaatttgtgaatgtatactatgaaatgcccgattttgat
ccttctcgtatttcaccctggttgttacgtattgaactagacagaaaaagaatgacagat
aaaaaactaactatggaacaaattgcagaaaagataaacgctggttttggagatgattta
aactgtattttcaatgatgataatgcagaaaagcttgttttgagaataagaattatgaat
aatgatgacaataaattgcaagaagaggaagagcaggttgataaaatggaagatgatgtt
ttccttcgttgtattgaagctaatatgttaagtgatatgactctacaaggcattgaagct
atagctaaagtatacatgcatttacctacaactgataataagaaaagaattgttataaca
gaaaccggtgaattcaaatcaattgcagagtggcttttagaaacagatgggactagttta
atgcgagttttaagtgaaaaggatgtagatcctgtccgtacatactccaatgatatttgt
gaaatatttgctgtaatgggtattgaagctgttcgtaaagccattgaaaaagaaatgaat
catgtaatttcttttgatggttcctatgtaaactatcgtcatttggctttactttgtgat
gttatgacagccaaaggccatttgatggctataactcgtcatggtattaatcgacaagat
acaggcgcacttatgaggtgttcttttgaagaaactgttgatattttgttagatgctgca
tcccatgctgaattggatccattgaaaggtgtatctgaaaatataattatgggacaactt
cctagaatgggtactggagcatttgatttacttttagatgctgagaaatgcaaatatggc
atagaaattccattagctggagcaatgggtggaccaggagtcttttttggaagtgcggcc
agtccaacaagtggtatgtcacctcagatgaccccttggaatcaaggtactacacctgct
tatgcaaatgcttggtctccaggattaggaagtggaatgacacctggtgctgctggcttc
tcaccatccgctgcaagtgatgccagtggatatagcccaggttacagtccagcttggtca
ccacagccaggatcaccagcttctcctgcatcaccatacattccaagtcctgtgggagca
atgtctccaagttattcaccatcatctccatcatttgctccaacttcaccatctttgact
cctcagagtcccagttattcaccaacttcaccatcttattctcctacaagcccaagttat
tctccaacatctccaaattatagtccaaccagtccaagttactcgccatcaagtccaagt
tattctcctaccagcccaagttactctccaacaagtcctagctattctcctacaagtcca
agttactctcctactagccctagttacagtcctacaagtccaagttattcacgaacaagt
cctagctactcgcctaccagcccaagctacagtcctactagtccaagttattcaccgact
agtcctagctacagtccaaccagtccaagttattctccaagttctcctaattatacacca
gcatcaccttcttattctcctactagccctagctatagtcctacaagccctagttactca
ccaaccagtccaagctacagtcctacaagcccaagttattcaccgagttctccaagttat
tctccacagagccctagttacagtccaggaagtcctaattattctttgacgagtccaaaa
tattctccaacttcaccttcttacagtcctaccagtccaagttattcacctgggtcacca
caatacacgcctacatctcccaagtacagccctacatctccaacatattctcctacttca
ccatcttattctccttcaagtcccaagtactctccttcaagtccacaatattctccaact
agcccatcatatacccctacttctccaaagtatagtcctccgtcgcctcagtatagccca
tcttcaccaaaatattctccaacttctccatcctattctcctacatcgcctcagtacagc
cctacaagtcctacttattctgttacgagtcctaaaggttcctcctattctccaactagc
cctggctattcaccatcttctccgtcttattcaccagcaagtcctgatgatgatgaagac
agtgacaaataa
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integrated database retrieval system
