Argiope bruennichi (wasp spider): 129969482
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Entry
129969482 CDS
T09870
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03013
Nucleocytoplasmic transport
abru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129969482
03015 mRNA surveillance pathway
129969482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abru03019
]
129969482
Messenger RNA biogenesis [BR:
abru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129969482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
129969482
NCBI-ProteinID:
XP_055940046
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Position
5:31915243..31939167
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AA seq
817 aa
AA seq
DB search
MEDRHRRRRVKSDDDSERSFSESDVEGDDANEAENSPLETPEKYSRRRRCNISTDESDDF
MISDQDSEPADVSKTIINNVVSVRRRRRKIATDESDELSFSDQDSEDDAKLILNRKGNTL
VKVAEDSEYESTEEEKAANETNKEPKDQESLSEIVDEEGGEEGIAESEDVEGDFLSGDAN
DDASEEEEEEEEEGEYVEEERQQGDGEECSPSNTATEKELDYDEDRRNPQYIPKKGMFYE
HDDRNNEDIKEKEPEPVRDRKKKLWLDEGKWGHDRFREEEQHPKSRTELIETYGYDIRNE
DGPPRARRRRRYGRGPTKYDRNWEDVTAYGREKFRGSPRGNSRGRRASGRFRGGPGFRGR
GRRDSNANSPRENEAEDLSANEEVPTKQESEDAEVNNAPVINSNEFPALPSKEASETPEE
TVPQQNYFNKNSSNISEAKSVRTLTFENSNYSNRNSVERENTPRRGKTPPFSANHERGSR
KPTPRVGRGSGRGEHSNRRGRGGMRHISPRFMENKMNNLNVDMEQLSLENNDTSNNVNPE
PAQPSESNGVLPSTVNSSEVSNMALKGAGDSSGRPKRYSSLRQRSLPETTTYQTPPPTVP
PPHPSYYETGYQTTLYAPTETCVPTPSTQSQTVTTTPIMNPSAYQTFTPPPYTDNYGLRM
PVTPPPRLFPQVSVPAPQPLLPPPPCITPAANIMSFAPAPPPASYHQFAYQQYAPAPPPP
PPAAPPSDIYTAPPAGITYYYPQNQPPTVRPTVQKRPKAAIPILPPPERETKRNDKKDSN
QSNNRNFSENSNDPAGVDVSLRTEASSQLQPAVGVES
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagacatcgaagaaggcgagttaagtctgatgacgactcggaaagatctttt
tcagaaagtgatgttgaaggcgacgatgcaaatgaagctgaaaatagccccttggaaaca
cccgaaaagtatagcagaaggagacgatgtaatatttctactgatgagtctgatgatttt
atgatttctgatcaagattctgaaccagctgatgtttcaaaaacaattattaataatgtg
gtgtctgttagacggagaagacgcaaaatagctactgatgagtcagatgaactttcattt
tctgatcaagattctgaagatgatgcaaaattaattttaaatagaaaagggaacacttta
gtaaaagtggctgaagattctgaatatgaaagtacagaagaggagaaggcagctaatgaa
acaaataaggaaccaaaagatcaagagtctttgtctgaaatagtagatgaggaagggggc
gaagaaggcattgcagagtctgaagatgttgaaggagattttctctcgggtgatgccaat
gatgatgcctcggaagaagaagaggaggaagaggaagaaggagaatatgttgaggaagaa
cgacaacaaggagatggagaggaatgttcaccctctaatactgccactgaaaaagaattg
gattacgatgaagatagaagaaatccccaatacatacctaaaaagggtatgttttatgaa
catgatgatcgaaacaatgaggatataaaagaaaaagagccagaaccagttagagatcga
aaaaagaaattgtggttagatgaaggtaaatggggacatgaccgtttccgagaggaagaa
cagcatcctaaatctagaactgaattgattgaaacctatggttatgacatacgtaatgaa
gatgggcctcctcgtgcaaggaggagacgtcgatatggacgaggtcctactaaatatgat
cgaaactgggaagatgtcactgcatatggccgagaaaaattcagaggttctcctcgagga
aattcaaggggacgaagagcatccgggcgtttcagaggtggccctggctttcgtggtcga
ggccgtagagattcgaatgccaacagtccaagagaaaatgaagctgaagatctttctgca
aatgaagaagtgcctaccaagcaggaatctgaagatgctgaagttaataatgctccagtt
atcaacagcaatgaatttcctgctctacctagtaaagaagcttctgaaacacctgaagaa
actgttccacaacaaaattatttcaacaaaaattcttccaatatttctgaagcaaaatct
gtgagaacattaacatttgaaaactccaactatagtaataggaattctgtagagagagaa
aatacgcctaggcggggaaagacgcctccttttagtgcgaatcatgaaaggggcagtagg
aaacctactccccgtgttggtagaggatctgggagaggagaacatagtaatcggcgagga
agaggaggtatgcgtcacatatcgcctcgttttatggaaaataaaatgaataacttaaat
gtggacatggaacaattatctctggaaaataatgatacttccaacaatgtgaatcctgaa
cctgctcaaccaagtgagagcaatggtgttttaccttcaactgtaaacagtagtgaagtt
tcaaatatggctctcaaaggtgctggagattcatctggacgtccaaagcgctattcatca
ttaaggcaacgtagccttccagaaaccaccacataccaaacacctccaccaacggtacca
ccaccccatccatcatattatgaaacgggataccaaactactttatatgcccctacagaa
acgtgtgttcctactcccagtacacaaagtcaaaccgttacaaccaccccgatcatgaat
ccttcagcatatcaaacctttactcctcctccttatactgacaactatggtcttcgaatg
cctgtgactcctcctcctcgattgttccctcaagtgagcgtgcccgcccctcaacccctt
ctacctccacctccatgtattacacctgctgcaaatataatgagctttgctccagcgcca
cctcctgccagttaccatcaatttgcataccagcagtatgcaccagcaccgcctccacca
ccaccagcagctcctcccagtgatatatatacagctcctcctgcaggaataacgtattat
tatcctcaaaatcagccaccaacagtaaggccaactgttcagaaacgacctaaagcagct
attcctatactaccgcctcctgaaagagaaacaaagagaaatgacaagaaagattccaat
caatctaataataggaatttttctgaaaattcaaatgaccctgcaggtgtagatgtatca
ttaagaactgaagcatcatcacagttacaacctgcagttggagtggaaagttaa
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