KEGG   Argiope bruennichi (wasp spider): 129971656
Entry
129971656         CDS       T09870                                 
Name
(RefSeq) replication factor C subunit 4-like
  KO
K10755  replication factor C subunit 2/4
Organism
abru  Argiope bruennichi (wasp spider)
Pathway
abru03030  DNA replication
abru03410  Base excision repair
abru03420  Nucleotide excision repair
abru03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:abru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129971656
   03410 Base excision repair
    129971656
   03420 Nucleotide excision repair
    129971656
   03430 Mismatch repair
    129971656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abru03032]
    129971656
   03036 Chromosome and associated proteins [BR:abru03036]
    129971656
   03400 DNA repair and recombination proteins [BR:abru03400]
    129971656
DNA replication proteins [BR:abru03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    129971656
  DNA Replication Termination Factors
   ELG1-RFC complex
    129971656
Chromosome and associated proteins [BR:abru03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    129971656
DNA repair and recombination proteins [BR:abru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     129971656
  Check point factors
   HRAD17(Rad24)-RFC complex
    129971656
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_24 AAA_assoc_2 AAA_16 AAA_22 AAA_11 AAA_30 bpMoxR SLFN-g3_helicase Mg_chelatase AAA_5 RuvB_N AAA_14 Cdc6_lid AAA_28 ResIII RNA_helicase AAA_19 DUF815 AAA_2 nSTAND3 DNAX_ATPase_lid AAA_7 AAA_3 AAA_18 Viral_helicase1 AAA_25
Other DBs
NCBI-GeneID: 129971656
NCBI-ProteinID: XP_055941599
LinkDB
Position
6:107159015..107174541
AA seq 363 aa
MEAFLKGYKPGSKPKPSVSKGDGTPTPSSSKKTKRPTPWVEKYRPKCMNEVVYQDEVVAV
LKKSLANPDLPNLLFYGPPGTGKTSTILALAREIFGDMFKARILELNASDERGIQVIRDK
VKSFAQQTASGIGHDGKPCPPFKIVILDEADSMTSAAQSALRRTMEKASKSTRFCLICNY
ISRIIDPLTSRCSKFRFKPLSKDTLCQRLNYIATEENVTFENDVIDSIIDFSEGDLRKAI
TLLQSAHRLKGDEGITVEDIADISGVVPTKWIKELITVCESDSYEKLEKFACNLGYEGYT
TGQVINQLHDEIVFNDALSNKQKAAICEKIAICDKRLLDGADEYLQLMDLCCTIMQQICH
PPE
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggaagcttttctgaaaggatataagccaggaagtaagccaaaaccttctgtttctaaa
ggggatggaacacccacaccttcctcttcaaagaaaacaaaaagacctacaccttgggtt
gaaaaataccgtcctaaatgcatgaatgaagttgtatatcaagatgaagttgttgctgtt
ttaaagaaaagtttggccaatcctgatcttcctaacttattattttatggtccacctgga
acagggaagacctcaacaattcttgccttagcaagagaaatatttggtgacatgtttaaa
gccagaatactagaattgaatgcatctgatgaacgaggtattcaagttattcgagataag
gtgaagtcttttgcacagcagactgctagcggtattggccatgatggtaagccatgccca
ccttttaaaattgtcatcttagatgaagctgattctatgacaagtgctgctcagtctgcc
cttagacgtacaatggaaaaggctagtaaatccactagattttgccttatttgtaattat
atcagtagaattattgatcccctgacttcacgttgctcaaaattccgcttcaagccctta
tcgaaagacacattatgtcagagattaaattatattgccacagaagaaaatgtgacattt
gagaatgatgtgatagattctataattgatttttcagaaggtgatctgcgaaaagccata
acactacttcagagtgcccataggttaaaaggtgatgaaggcatcactgttgaagatata
gcagatattagtggggttgttcctacaaagtggattaaagaattaattacagtatgtgaa
tctgacagttatgaaaaacttgaaaaatttgcctgtaatttaggttatgaaggttacacc
actggtcaagtgatcaatcaacttcatgatgaaatagtatttaacgatgctctcagtaac
aaacagaaggcagcaatatgtgaaaaaatagcaatctgcgacaagcggcttttggatggt
gctgatgaatatttacaattgatggatctgtgctgtacaataatgcagcaaatatgtcac
ccacctgaataa

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