Argiope bruennichi (wasp spider): 129974956
Help
Entry
129974956 CDS
T09870
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5-like isoform X1
KO
K11125
protein SMG5
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129974956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abru03019
]
129974956
03032 DNA replication proteins [BR:
abru03032
]
129974956
Messenger RNA biogenesis [BR:
abru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129974956
mRNA cycle factors
Common to processing body (P body) and stress granule
129974956
DNA replication proteins [BR:
abru03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
129974956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
129974956
NCBI-ProteinID:
XP_055943782
LinkDB
All DBs
Position
1:131997693..132024077
Genome browser
AA seq
941 aa
AA seq
DB search
MKSTVTKEIVKFGNDASRRLYRGATEAARKLETRLGQGSNLTELFSSEITELRMRLKDYC
ERLIFADPVEYGKKAEDLLWRKVFYDFFWRCKQNRRKLLESEYHRNAFRSHLLAGIGFYH
HLLLRIQTEFHLNLEGKVDVPLLWHLKGVKKERWKKYQLSAASDENVQTWADQASHRILI
YLGDLERYIAELDEPESNHLAERYYQQAFCLNSQNGTPHNQLGSLYSNRFDSAYHYMRCL
SSRERFEGADNNLVRLFEKNEEVIKQLYSSDCVEKKSLKCTRFLSRFLKLCQMFYFKPSE
NYNAQTYCQDILKEFGITRSASTYENDSETEDIDAWLSEDIIFKVVVMSLLCVWKSQEKG
PTYASVAISFSFAFFSYVVQRVTRQLSIAILDLKPTESLQNGCIIENEKNLSKQLTLSIS
KEQLDDTSEENEINKDLLLKKMSGKKSSLKKFSARRLHRLRRRRKLSSTSQDDSELSDGE
MSDLPESDEESGLLNSDVSCSSESDDEDENIIEENGLSIDGELDANLDNNLILTNGISKN
LSDDNAKENHDESDKNSSIDVNSVLGNPTIAPEKFVHILRKIKLLPCLKILTDWLRINEN
ILSAGAVTSPYLLSCLIELLNILLKIEDKLSNGTNRFQRLLKNDETVIQDYPLPEDTVLQ
SFPILKDIHSKLSFDVSKRRALSTSEQVYLRVQCLLSFGKCVIKASESSVDFDSEKKKYY
FNLSNKAKESNKEEMSSVKTANRDAESQKHYLMRSMAHLWLKAEVDDLETFVEGQASRQL
SPILVTDASVLCCNLPAIKQLVNTKKFIVVVPLVVIANLDQLKKESIAAREATRWLEFEL
CKGGRHVRAQNQVEKSSLVPMKYPRKKDKEAWDFYQVLECCNYLVQQQTNGKSNCHLVTL
LVGSFHHLPDNAIAIAQSIDVTIEKIGSFFAKWRTSLKKPG
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcacagttacaaaagaaatagtcaaattcggaaatgatgcttctcgacgtttg
tacagaggagccacagaagctgcaaggaaactggaaactcgtctaggacaaggatcaaat
ttaacagagctgttttcttctgaaataacagagttaagaatgaggttgaaagactactgt
gagcgactaatatttgctgatcctgttgaatatggtaaaaaagcggaagatcttctatgg
cgcaaagttttttatgactttttctggcggtgtaaacagaatagaagaaaacttttagaa
tctgaatatcataggaatgcctttcgtagtcacttgttagctggaattggattttatcat
catttgttattacgaatacagacagaattccacttgaatctggaaggaaaagtagatgtt
ccattactttggcatttaaagggcgttaaaaaagagagatggaaaaaatatcagctgtca
gcagctagtgatgagaatgtgcagacttgggcagatcaagcaagtcatcgaatattgata
tatcttggagatttagaacgatatattgcagagctagatgagcctgaaagcaaccatctt
gctgaaagatattatcaacaagctttttgtctcaacagccaaaatggaactcctcataat
caattaggttctctatattccaatagatttgattcagcatatcattacatgagatgcttg
tcgagtcgtgaaagattcgagggtgctgataataatctagtacgcttgtttgagaaaaat
gaagaagtgataaagcagctgtattcatctgactgtgttgaaaaaaagtcattgaaatgc
acaagatttttatctaggttcttaaaattgtgccaaatgttttattttaagcccagtgaa
aattataatgcccaaacatactgccaggatattcttaaagaatttggcataactcgcagt
gcctcaacttatgaaaatgattctgaaacagaagatatagatgcctggctctctgaagat
ataatttttaaagtggtggtcatgtctttgttatgtgtatggaagtcgcaagaaaaaggt
cctacatatgcttctgttgctatatcattttcctttgctttcttctcttatgttgtacaa
agagtcacaagacagttgtcaatagcaatactggatttaaagcctacagaaagtcttcag
aatgggtgtataattgaaaatgagaagaatctttcaaaacaattaacactgtccatttcc
aaggaacaattagatgacacaagtgaagaaaatgaaataaacaaagacctattattaaag
aaaatgtctgggaaaaaatcaagtttaaagaaattttctgcacggcgcttgcatagattg
cgtcgccgacggaaacttagcagcacaagccaggatgattcagaattgagtgatggagaa
atgtcagatttaccagaatcggatgaagaaagtggtttgctaaattctgatgtaagttgt
agtagtgagagtgatgatgaagatgaaaatataattgaagaaaatggcctaagcattgat
ggtgaattggatgctaatttagataataacttaattctaactaatggaatttcaaaaaat
ctttctgatgataatgcaaaggaaaatcatgatgaaagtgataaaaactcttctatagat
gttaatagtgttcttggcaaccctactatagctccagaaaagtttgttcatattctccgt
aagataaaactgttgccttgtctcaagattctaacagattggcttagaataaatgaaaac
attttatctgctggtgctgtgacttcaccatatctgttatcttgtcttattgaactgtta
aatatactgctaaaaatagaagataaactttcaaatggtactaatcgttttcagagactt
ttaaaaaatgatgaaactgtcattcaagattatccattacctgaagatactgttttgcaa
tcttttcccatattaaaagatatacattctaagctttcttttgatgtttctaaaaggaga
gctctatctacttcagaacaagtatatctaagagtacaatgtttgctttcatttggaaaa
tgtgtcatcaaagcttctgaatcatcagtggattttgattccgagaaaaagaaatactat
tttaatctgagtaataaagctaaagaatctaataaggaagaaatgagttctgttaaaaca
gctaatcgtgatgcagaaagccaaaaacactacttgatgagaagcatggcacatctgtgg
ttaaaagctgaagtagatgatttggaaacatttgttgaaggccaggcctctcgtcaatta
tccccaattctagttacagatgccagtgttttgtgttgtaatttacctgccataaagcaa
cttgttaataccaagaagttcatagttgtcgttccattagtagttattgcaaatctggat
caattaaaaaaagaaagcattgcagcaagagaggctactcggtggttagaatttgaatta
tgtaaaggtggtcgccatgttcgagcgcaaaatcaagtggagaagagtagtctagtccca
atgaaatatccaaggaaaaaagataaagaagcatgggacttttatcaagtgcttgaatgt
tgcaactaccttgtacaacagcaaaccaatggcaaatcgaattgccatctagtcacatta
ttggttggatcatttcaccatttgcctgataatgctattgcaattgctcaatctatagat
gttactattgagaaaattggaagcttttttgcaaaatggcgtacttccctgaagaaacct
ggctga
DBGET
integrated database retrieval system
