Argiope bruennichi (wasp spider): 129975736
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Entry
129975736 CDS
T09870
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129975736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abru03041
]
129975736
Enzymes [BR:
abru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129975736
Spliceosome [BR:
abru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129975736
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
PWI
nSTAND3
SRP54
Cas3-like_C_2
AAA_30
T2SSE
Flavi_DEAD
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
129975736
NCBI-ProteinID:
XP_055944900
LinkDB
All DBs
Position
1
Genome browser
AA seq
1031 aa
AA seq
DB search
MSVNQWINDELHTILGFSDKFTAEFLLNLASKSTSPDALIGKIKDTRTLDINSNVIEFAH
NLWAKVPHAESKEKPARVREREIMEILQKNQSYKLIEDDDDYLPVQEEKHSKKSKKRKNL
RKRDSSSSDNDEAPAKIVKNSPKSDSESDYEKMERERLEDLKERDEFSARLKKKDKEKTR
NIVEKSDRKAFEEAAKRLRLEAEDRKKIVPKLRTESRRQYLAKRKDDKLMELEGDIQDEE
YLFSDVKLTEKEERELQYKKKILELAKQHDKAKEMEKIDRYHIPEASGKDISKKYEEVDE
KEKAPNAEQLKWEQERLGFARMTFGAADAKKKHKEKEYDFVFDDAIEFVQTIKMPGSKDV
PEPKEELSEKEKKKLSIQETRKSLPIYPFREDLLQAIDNHHILIIEGETGSGKTTQIPQY
LYEAGYTKGNKKIGCTQPRRVAAMSVAARVAEEISVKLGNEVGYSIRFEDCTSERTVLKY
MTDGMLLREFLSEPDLSSYSVVIVDEAHERTLHTDILFGLVKDIARFRPDLKLLISSATL
DAEKFSQFFDDAPIFRIPGRRFPVDIFYTKAPEADYLDACVVTVLQIHFTQPLGDILVFL
TGQEEIETCHEMLLERTRKLGSKMRELIILPIYANLPSDMQAKIFEPTPPGSRKVVIATN
IAETSLTIDGIIYVIDPGFCKQNSFNARTGMESLVVTPISKASANQRAGRAGRVAAGKCF
RLYTAWAYQHELEDNTIPEIQRVNLGNAVLLLKSLGINDIIHFDFLDPPPHESLVLALEQ
LYALGGLNHQGELTKLGRRMAEFPVDPMMSKMLLASEKYKCSEEILSIAAMLSVNNAIFY
RPKDKIVHADTARKNFFSTAGDHLTLMNVYNQWVESEYSTQWCFENYIQHRSMKRARDVR
EQLEGLMDRVEIELVSNPLDTMAIRKAITAGYFYHTARLSKSGQYKTAKQQQTVTIHPNS
ALFEDLPRWLVYHELVFTTKEYMRQVIEIEGVWLLEVAPHYYKSKDIEDSTNKKLPKNTG
KSQADLKRQYN
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaatcaatggataaatgatgaacttcacactatattaggtttcagtgataaa
tttactgccgaatttttgttaaatttggcttctaagagtacaagtcctgatgccctaatt
ggcaaaattaaggatactagaacgctggatataaactctaatgttattgaattcgctcat
aatttatgggcaaaagtacctcatgcagaatctaaggaaaaacctgctcgagtacgagag
agagaaataatggaaatattgcaaaagaatcaaagttataaattaattgaagatgatgat
gattacttacctgttcaggaagaaaaacattcaaagaaatccaaaaagcgtaagaattta
cgaaagcgagattcttctagcagtgacaatgatgaagcaccagcaaaaatagtaaaaaat
tctccaaaatcagattctgaaagtgattatgaaaaaatggaaagagaaagattagaagat
ttaaaagaaagggatgaattttctgcacggttaaagaaaaaagataaagaaaaaacaaga
aatattgtggaaaaatcagacagaaaagcttttgaagaagcagcaaaaagacttcgtctt
gaagctgaagatagaaagaaaatcgttcccaaattaagaactgaatctcggaggcagtat
ttagcaaaacgaaaagatgacaaacttatggaattagaaggagatattcaagatgaagaa
tatcttttttctgatgtaaaacttactgagaaagaagaaagggaacttcaatataagaag
aaaatcttggaattggcaaaacagcatgataaagctaaggaaatggaaaaaattgatcgt
tatcatatacctgaagcatctggaaaagatattagcaaaaagtatgaagaagttgatgag
aaagaaaaagcaccaaatgctgagcaactgaagtgggaacaagaaagattaggatttgcc
cgaatgacatttggtgcagcagatgctaaaaagaaacacaaagaaaaagaatatgatttt
gtatttgatgatgctattgaatttgtacaaacaataaaaatgcctggatctaaagatgtc
cctgaacctaaggaagaattatcagaaaaagagaagaaaaaactcagtatacaagaaaca
agaaagagtcttccaatttatccatttcgagaagacttattacaagctatagataatcac
catattctcatcatagaaggagaaactggatctggaaagactacacagattcctcaatat
ttatatgaagcaggatacacaaaaggcaataagaaaataggatgtactcaaccaagaaga
gtagcagctatgagtgttgctgctcgagttgctgaagaaatttctgttaagttaggtaat
gaagtagggtatagtattcgatttgaagattgcacctcagaaagaacagttcttaaatat
atgacagatggaatgcttcttagagaatttctttctgaacctgatttatcatcatatagc
gttgttattgttgatgaagcccatgagagaactcttcatactgatatattgtttggatta
gttaaggacattgcacgctttcgtccagatttgaaattgctgatatcaagtgcaacctta
gatgcagaaaaattttctcaattttttgatgatgctcctatttttaggatacctggtaga
agatttccagttgatattttttatacaaaagcaccagaagctgattatttagatgcatgt
gttgtaactgtactacaaatacattttacccaacctcttggtgatattttagtgtttttg
actggacaagaagaaatagaaacttgtcatgaaatgcttttggaaaggaccagaaagctt
ggctccaaaatgcgtgaattaataatattacctatttatgctaatttaccatcagacatg
caagcaaagatatttgaaccaacaccaccaggttcaagaaaagttgtgattgccactaac
attgctgaaacttctttaacaattgatggtattatttatgttattgatcctggattttgc
aaacaaaatagttttaatgctcgtacaggcatggagtctctggttgttactcctatctca
aaggcctcagcaaatcaaagagcaggtcgtgctggacgagtagctgctggaaaatgtttt
cgtttgtatactgcatgggcatatcagcatgaacttgaagataataccattccagaaata
cagagagttaatttgggtaatgctgttcttttgttaaaatcattaggaataaatgatata
atacattttgatttcctggacccacctccacatgaaagtttagttttagctcttgaacaa
ctttatgcattgggaggacttaatcaccaaggtgaacttacaaagcttggccgtagaatg
gctgagttccctgttgatcctatgatgtccaaaatgcttttagcttctgaaaaatacaaa
tgctcagaagaaattctttcgattgcagctatgctttcagtaaataatgccatattttat
agaccgaaagataaaattgtacatgctgatactgctagaaaaaattttttcagcacagct
ggtgatcatttaactttaatgaatgtttacaatcaatgggtggagtcagaatatagtact
caatggtgttttgaaaattacattcaacatagatcaatgaaaagggctagagatgtccgt
gaacagctagaaggtttaatggaccgtgttgaaattgaacttgtatcaaatcctttagat
acaatggcaattcgaaaagccataacagctggttatttttatcacacagctaggttatct
aaaagtggacagtataaaactgcaaaacagcaacaaacggttacaatacatccaaacagt
gccttatttgaggatttacctagatggcttgtgtatcatgaacttgtctttacaacaaaa
gaatatatgagacaggtaatagaaattgaaggtgtctggcttttagaggttgcacctcat
tattacaaaagcaaagacattgaggattctactaataaaaagttgccaaaaaatactggt
aaatcccaggcagatttaaagcgtcagtataattaa
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