Argiope bruennichi (wasp spider): 129980875
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Entry
129980875 CDS
T09870
Name
(RefSeq) spliceosome RNA helicase Ddx39b-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03013
Nucleocytoplasmic transport
abru03015
mRNA surveillance pathway
abru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129980875
09122 Translation
03013 Nucleocytoplasmic transport
129980875
03015 mRNA surveillance pathway
129980875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abru03019
]
129980875
03041 Spliceosome [BR:
abru03041
]
129980875
Enzymes [BR:
abru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129980875
Messenger RNA biogenesis [BR:
abru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129980875
Spliceosome [BR:
abru03041
]
Complex C
Other components
EJC/TREX
129980875
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129980875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
129980875
NCBI-ProteinID:
XP_055947299
LinkDB
All DBs
Position
8:complement(25932170..25947018)
Genome browser
AA seq
423 aa
AA seq
DB search
MAENDAELLDYEDEEEQEQTAPDPTIETKKPAGGYVSIHSSGFRDFLLKPELLRAIVDCG
FEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLDPVDNQVSVLVMCHTRE
LAFQISKEYERFSKYMPSIKVGVFFGGMTITNDEKVLKSNCPHIVVGTPGRILALVKSKK
LNLRYIKHFVLDECDKMLEALDMRRDVQEIFRSTPHEKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQYYVKLKDNEKNRKLFELLDLLEFNQVVIFVRTVPRCMALA
QLLVEQNFPAIAIHRAMTQEDRLSRYQQFKEFHKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNEVQERFDVNISELPEEIDISSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgatgcagaattattggattatgaagatgaagaggagcaggaacagact
gctcctgatcctaccatagaaacgaaaaaaccagccggtggttatgtatctatacatagt
tctgggtttagagattttttgttaaaacctgaacttctgagggctatagtagattgcggt
tttgaacatccatctgaggtccaacatgagtgtattcctcaagcaattctcggaatggat
atattgtgccaagctaagtcaggtatgggtaaaacagctgtgtttgttttggctacattg
caacaattggatcctgttgataatcaggtctctgtgttagttatgtgtcacactagggag
ttggcatttcagatttccaaagaatatgaacgtttctctaaatacatgcctagtataaag
gttggtgtgttctttggcggaatgaccatcactaatgatgaaaaagtattgaaatccaac
tgtcctcatattgttgttggaacaccaggaagaatattggctcttgtaaagtcaaagaag
ttgaatttacgttacatcaagcattttgttcttgatgagtgtgataagatgttggaagct
ttagatatgcgtcgagatgtacaagaaattttcagaagtactcctcatgagaagcaagta
atgatgttcagtgctaccttgagcaaagagattcgccccgtttgcaagaaatttatgcaa
gatcctatggaagtatacgttgacgatgaagctaagcttacccttcatggacttcaacaa
tattatgtaaaattaaaggataatgaaaagaacaggaaactttttgaacttctcgattta
cttgaattcaatcaggtagttatctttgtgagaacagttcctcggtgtatggctttggcg
caacttcttgtggaacagaattttccagctattgctattcatcgtgctatgactcaagaa
gacaggctctcaagataccagcagtttaaagaatttcacaaacggatattggtggcaact
aacctttttggtagaggaatggatattgaaagagttaatattgtctttaattatgatatg
ccggaagactcggatacatacctgcatagagtagctcgtgctgggagatttggaacaaaa
ggtttagccataacatttgtttctgatgaaactgatgctaagactttgaatgaagttcag
gagagatttgatgtaaatatttcagaactgcctgaagagatagacatatcttcatacatt
gaaggacgataa
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