Argiope bruennichi (wasp spider): 129985353
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Entry
129985353 CDS
T09870
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129985353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abru03019
]
129985353
Messenger RNA biogenesis [BR:
abru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129985353
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129985353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
129985353
NCBI-ProteinID:
XP_055951328
LinkDB
All DBs
Position
9:complement(117861723..117906992)
Genome browser
AA seq
2354 aa
AA seq
DB search
MNLDSLSFALSNISYSVANLTKKNFKSSVQEITRLVTCHGLEAERHLLRCLFSHVDFSGD
GKSSGKDFHQTQLLIQECASILHKPNFVSTFCYAIDCPLQQQKSLRPSSSLLSQLSKVLK
LSSVQEISFGLALLHSSIPDHINHSVNFLKLKLPDFIRNICDQDLSSLEDSFDLPPVIVH
LLLHQLNCGNKDLGISSESKEKLNKRLSLDFADKVPLLPYLRVDNLDPMMENIGNVPKSS
DDSLVEVIQEMGYNFTASVEECKNNMAQIGLREIKPSLVARVLSMMARSHTGLTDAMPLQ
NMNSNMVMWGGEKEKSEVNQQATWNVEVFVQAVRDLAPSLDWKEIVHDLDNPDFLLKDRK
GLKLLWQGLILGLSQETFPMDRMYRRWRNSEGQFSFFQQVLNCCDIVCLTDYPHRPVLTD
ALKAPPEDDNKSISNWKSLDLIETLLCLSETPFFKDELFKFPLAHCPDLLILGLIQTSRA
INPLHKELLSNLIPIFLGNHPNSAMVFHLAWHSQYHSATIRNIIMHAMADWYARGDGDQT
RLSRILDVAQDLKALSMLLNLTPFLFVIDLACLASRREYLKLDKWLTDKVRDHGESFVES
CVNFLTRRSPQIMGGNIKEENLPKSALPTETLATMLGFLHSLAPSLPQELSEKILTMVAN
CATVLNKNRLPPPGVVKTSQGLQSVLSSAVINTPNTPLDQLVNLTSSVSGLNLGNNVKSS
TGNTAFPPLSLGSFTIPSSGSPAKMLSVGTPAIKSGTTSSQITQSQFSNVMASGTPQLPT
QFGDVGQILTESSGPVSKEIEDEANSYFQRIYNHAPHSSLPIEEVLDMLKRFKESPIQRE
REVCSCMIKNLFEEYRFFPQYPDKELQITAQLFGGIVDQNLVSYLSLGLALRYVLESVKK
PSNSKMFFFGVTAMDRFKTRLKDYPAYCQHLTTLPNFHELPQNLVEYIEYGARSQEPPLN
RPVTVSQALNTTSAFPNITQAPSMPLTTTTTTVTITTATPKITGKPSIANATNIDTLLGA
TEKDEKLVNPPDSVQDKVSFIVNNLSQSNLSQKTEEFREIVKEEYWPWASQYLVMKRASI
EPNFHTLYSNFLDTLKLSDLTKLVIRETFRNIKVLLRSDKTVANFSDRSLLKNLGHWLGI
LTLAKCKPILQVDIDIKSLIIEAYHNGSHELLYVVPFVAKVLESCAKSKVFKPPNPWTMG
IMKVLCELHKEPDLKLNLKFEIEVLCKTLNIDINEIKPSGILKDQDRILKIDSQLSPLPK
HKEQQAVGSVNIQVPPQPALSNVVPPTANPLANNVLHEENIPTLGSPPTTLSSGQIPPLC
AAAPPQPHFAYGDINIVNLSQIAQHLNINSTIPLFQTHSQLKQFVRVAIERAVQEWLAPV
VERSVKISLTTCEQIIKKDFALDPEEARMRASAHHMIRSLTAGMVMITCRDPLFVSIITN
LRTAFLGALRNPTPQQKELTEQAAEVVATENLELACCFIQKTAVEKALPEIDKRLASEYE
ARKHARSEGRRYCDPVALTYQAERMPEQIRLKVGGVTPQQMAVYEEFARMIPGFLPSGER
EQQQANLGRSVAVSDLLMMQPYATDEMSQIYDKLISELEMLLHATNHSNPHILALHSLLE
AVLMARNTREMTSAVALLQKAVDGFLEGMCQAASDSDVSMRFRDGHLLVMKALADPRVYG
HQWTSKQITRWLIESREECRYNPEAVDLLIRNHLINLQAYDLHLTQSMENGMNMMAVQFA
MQLVKMYLLDERHTGLVSEADLYNTVETLGRITSNQRQLPDGLNQLLDMLRSTGEPFLDR
APGSGPIGMMYSGITQAREFDDPPGLYEKTEFLLREWVTMYHSPKAGKDSTNAFSLFVHQ
VSAPRFMNLQGILKTDELITRFFRLSTEMCVDLSYRVLMDQNLKSPTVIRAKCFHTLDAY
VRLIALLVKHSGDNNNTVTKVNLLNKVLGIVTGVLLQDQELRGVEFQQLPYHRIFIMLFL
ELSAPEAVLEAINPQILTAFCNTLYYLRPQKAPGFAYAWLELVSHRVFLGRVLALSPAQK
GWTMYAQLLVSLFKFLAPFLRNVELAAPIQLLYKGTLRVLLVLLHDFPEFLCDYHYGFCD
VIAPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEITQAPRILANFNNLIQPPSFKK
DLDSYIKTRAPVTFLSELRTSLQVSNEPGMRYNIPLINALVLYVGTQAIQYIQNKGNTPN
MSTITHSSHMDIFQNLAVDSDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTE
AIQEQITRVLLERLIVNRPHPWGLLITFIELIKNQNFKFWNHEFVRCAPEIEKLFESVAR
SCMHPKPSSEQTTS
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttgctttgtctaatattagttattctgtggctaatttg
actaaaaagaattttaaatctagtgtgcaagaaataaccagacttgtaacctgtcacggg
ttagaggctgagcggcacctcctgcgctgtctattttctcatgtggatttcagtggtgat
ggtaaaagtagcggtaaagatttccatcagactcaacttttaatacaggagtgtgcgtct
attttacataaaccaaattttgtatcaacgttttgttatgcaatagactgccctctacaa
caacaaaagagtttaagaccatcgtcctctcttttatcccaattgagtaaagttctcaag
ttatcttctgttcaagaaatttcatttggattagctcttttgcattcttcaattcctgac
cacattaaccattctgtgaattttttgaaactaaaacttcccgattttattaggaatatt
tgtgaccaagatctgtcaagccttgaagattcttttgacttacctcctgtaattgtacat
ttgttgcttcatcagctaaactgtggaaacaaagatttaggtatatcatcagaaagcaag
gagaaattgaataagcgactgagtctagattttgctgacaaagtacctttactgccttat
ttacgtgtggataatttagatcccatgatggagaatattgggaacgtaccaaaatcatct
gatgattctctagtagaggtcatacaggaaatgggttataacttcactgcaagtgttgaa
gaatgtaaaaataacatggcacaaattggactaagagaaataaagccatctctggttgcc
agagttctttcaatgatggcccgatctcatactggactgacagatgctatgccacttcag
aatatgaatagtaatatggtgatgtggggtggagaaaaagaaaaatctgaggttaatcag
caagccacatggaatgtggaagtttttgtccaagctgttcgtgatttggcaccatcatta
gattggaaagaaattgttcatgatcttgataatcctgattttcttctgaaagaccgaaag
ggtttgaaacttctatggcaaggtctcattctgggcttaagtcaagaaacttttcccatg
gatagaatgtatagacgttggagaaactctgaaggccagttctcattttttcagcaagtt
ctcaattgttgtgacatagtatgcctaacagattatccccaccgtcctgttttaacagat
gccttaaaagctcctcctgaagatgataacaaaagcatttcaaattggaaatcacttgac
ctcatagaaactttgttatgcttatcagaaacacctttttttaaagatgaattgtttaaa
tttcctctggcacattgtcctgatcttctcattttaggtctcattcaaacttcacgagcc
atcaatccccttcataaggagctattgtcaaatttaattccaatttttcttggaaatcat
cctaactctgcaatggtttttcatcttgcttggcatagtcagtatcattctgctacaatc
cgcaacatcatcatgcatgcaatggcagattggtatgctagaggtgatggtgaccaaacc
agactttccagaattcttgatgtggcacaagatttgaaagctttatctatgttgttaaat
ttaacaccatttttatttgttattgacctagcttgtctcgcctctcgaagggaatacctt
aaactggataaatggttgacggataaagtgagagatcatggggagtcatttgttgaatca
tgtgtgaattttttgacccggcgatctcctcagataatgggtggaaatattaaagaagaa
aatcttcctaaaagtgctctaccaactgaaacccttgctacaatgcttggatttttgcat
tctttagctccgtcattaccacaggagctttccgaaaaaattcttaccatggttgcaaat
tgtgcaacagttcttaacaaaaatcgactgcctccacctggtgtagtgaaaacatcacaa
gggttgcaatctgtattgtcatctgctgtcattaatacacctaatacaccactggatcaa
cttgtaaatcttacttcatctgtatctggacttaatctgggaaataatgttaagagtagt
acagggaacactgcatttccaccattgtctcttgggagctttactattccatcttctgga
tcgcctgcaaagatgttgtcggttggaactcctgctataaaaagtggtacgacaagtagc
caaataacacaaagccaattttcaaacgttatggcttcaggtaccccacaactaccaacc
cagtttggagatgttggacaaattcttactgaatcatctggtcctgtatcaaaagaaatt
gaagatgaagcaaatagctactttcaaagaatctataatcatgcaccacattcctcttta
cctattgaagaagttctggatatgttaaaaagatttaaagaatctccaattcaaagagaa
cgggaagtttgtagctgtatgataaaaaatctctttgaagagtatagattttttcctcag
tatcctgataaagaacttcagataactgcacaattatttggagggattgttgatcaaaat
ttagtgagctacctcagccttggcttggctttgcgttatgtgctagagtctgttaaaaag
ccatcaaatagtaaaatgttcttctttggagtaacagccatggatagatttaaaacaagg
ttaaaagactaccctgcatattgtcagcatcttactacactgccgaattttcatgaattg
ccacaaaatttagttgagtatattgaatatggtgccagatctcaagaaccacctctgaat
aggcctgttacagtttcacaagcattaaatacaacatctgcatttcctaacattactcaa
gctcctagtatgccattgacaaccacgacaactactgtcaccatcacaacagcaacacct
aaaataactggcaaaccttctattgctaatgcaaccaacattgatacactcttgggtgct
actgaaaaagatgagaaattggtaaatcctcctgattcagtgcaagataaagtttcattc
attgtaaataacttgtctcagtcaaatttatcgcagaaaactgaggaatttcgagaaatt
gttaaagaggagtactggccttgggcatcccaatacctagtcatgaaaagagcttccatt
gaacccaattttcataccttatattcaaattttctggatacattgaaactctctgatctg
acaaaattggtgattagagaaactttcaggaatattaaagttttgttgcggagtgataag
acagttgcaaatttctctgatcgatctcttctgaagaacttgggacattggttaggtatt
ttaactcttgccaagtgtaaaccaatacttcaagttgatatagatatcaaatcacttata
attgaagcctatcacaatggatcacatgaactgctttatgttgttccttttgttgccaaa
gtgttagaatcttgtgcaaagagcaaagtgtttaaaccacctaatccctggacaatggga
ataatgaaagtgctgtgtgaattacataaggaaccagatttgaaacttaaccttaagttt
gaaatcgaagtcctgtgtaaaactttaaatatcgatataaatgaaattaagccttcaggc
attctcaaagatcaagatagaatattaaagattgattcccagttgtctccattaccaaaa
cataaagagcaacaggctgttggttcagtcaacatccaagttccacctcagcctgctctt
agcaatgtggttcctcctacagcaaacccactagctaataatgtacttcatgaagagaat
ataccaacattaggaagtccacctacgactttgtcttctgggcagattccacctttatgc
gctgctgctcctcctcagccacactttgcttatggggatattaatattgtcaacttaagt
cagatagcacagcacctaaacataaattctacgattcctttattccaaactcattcccaa
ttgaagcaatttgttagggtagctatcgaaagagctgttcaagaatggcttgctcctgtc
gtagaaagatctgtgaagatttctctgacaacctgtgaacaaatcatcaagaaggatttc
gccctcgaccctgaagaagcgagaatgagggcttcagctcatcatatgatcagaagtttg
actgctggtatggtgatgattacatgtcgtgaccctctgtttgtttcaatcatcactaat
ttgagaactgcttttttaggagctttgaggaatcctactccacagcaaaaagaattgaca
gagcaagcagcagaagttgtggccactgaaaacttggaacttgcttgttgctttattcaa
aaaactgctgtcgaaaaagctctccctgaaattgacaagcgtttagcctctgaatacgag
gcaagaaaacatgctagaagtgaaggtagacgttattgtgacccagttgcgttaacttat
caagcagaaaggatgccagaacaaataagattaaaggttggtggtgttactcctcagcaa
atggctgtttatgaagaatttgcccgtatgattcctggattcttaccaagtggtgaaaga
gagcagcagcaagcgaatcttggaagatccgtggctgtgagtgacctactgatgatgcag
ccatatgccacagatgaaatgtcccagatttatgacaaactaatcagtgaactggaaatg
ttactgcatgctacaaatcattctaatcctcatatactggccttgcacagtttattggaa
gcagttctaatggcccgaaatactagagaaatgacatcagctgttgccctgctacaaaag
gctgttgatggatttttggaaggtatgtgtcaagctgcttcagacagtgatgtgtcaatg
cgctttagagatggtcatctgctagtgatgaaagctttggctgatcctagagtctatggt
catcaatggactagtaaacagattacacgttggttgattgaaagtcgtgaagagtgcagg
tataatccagaagctgtagatcttttaattagaaatcatctcatcaacttacaggcttat
gatttgcatctgacccagtcaatggaaaatggaatgaatatgatggcagttcaatttgcg
atgcaattagtgaaaatgtacttattggatgaaagacatactggtttggtatcggaggct
gatctgtacaatactgttgaaacgttaggtcgcataacatcaaatcaacggcagcttcct
gatggattaaatcaattgctggatatgttgcgtagtactggtgaacctttcctggatcgt
gctcctggcagtggtcccataggaatgatgtactctggcataactcaagcccgagaattt
gatgatcctcctggtctttatgagaaaacagagtttttattaagagagtgggttactatg
taccattcacctaaagctggaaaggacagcacaaatgctttctcattgtttgtacatcaa
gttagtgctccgagatttatgaatttacaaggaatattaaagactgatgaactaattact
cgcttcttccgcctgagtactgaaatgtgtgttgatctgagttatcgtgttctcatggac
caaaaccttaaatcgccaacagttattcgtgccaagtgttttcatactttggatgcctat
gttcggctgattgctcttctggtaaagcatagtggtgataacaacaacacagtaactaaa
gttaatcttttgaacaaggtattaggtatagtgactggagtgcttcttcaggatcaagag
ttgagaggggtggaatttcagcaattaccttatcacagaatttttatcatgttgttttta
gagctgagtgccccagaagccgttttggaagctataaatccccaaatacttactgccttt
tgcaatactctgtattatttgaggccacagaaagctccagggtttgcttatgcttggttg
gaacttgtttcacatagagtattccttggtcgagttctagctctttcacctgcccaaaag
ggatggacaatgtatgcccagttgctagtcagcctctttaaattccttgcccctttccta
cggaatgttgaacttgcagcacctattcaattgttgtacaagggtacacttcgtgtattg
ctagtacttctgcacgattttcctgagttcttatgtgattaccattatggattttgtgat
gtcatagctcctaattgcattcagatgagaaatttaattctcagtgcattccctcgcaac
atgagacttccagatccatttacacctaacttaaaagtggacttgctaccagaaatcacg
caagctcccagaatccttgcaaatttcaacaatctgattcaaccaccttcattcaaaaag
gacttggattcatacatcaaaacaagagcccctgtaacatttttgtctgaacttagaaca
agtttgcaggtgtcaaatgagcctggaatgcggtacaacatacctcttatcaacgctcta
gttttatatgttggcactcaagctattcagtatatccaaaataaaggcaatactccaaac
atgagcacaattacccattcatctcacatggatattttccagaaccttgctgtagactct
gacacagaagggcgctatttgttcctcaatgccattgctaaccagttgcgctatcctaac
agtcatactcattacttcagttgtacccttttgtacctgtttgcagaagcaaatactgaa
gccattcaagaacagattacaagagttttgttagagcgtctgatagtcaatcgacctcat
ccttggggattattgatcactttcattgaactcatcaagaatcaaaacttcaaattttgg
aatcatgagtttgttcgatgtgctcctgagattgaaaagttgtttgaatctgttgcaagg
tcctgcatgcatccaaagccttcctcggagcagaccacttcgtga
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integrated database retrieval system
