Argiope bruennichi (wasp spider): 129989660
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Entry
129989660 CDS
T09870
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
abru
Argiope bruennichi (wasp spider)
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abru03041
]
129989660
Enzymes [BR:
abru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129989660
Spliceosome [BR:
abru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129989660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
Ank_2
Ank
DEAD
Ank_4
AAA_19
Ank_5
nSTAND3
Ank_3
HA2_N
ATPase
Dynamin_N
PhoH
T2SSE
AAA_22
Motif
Other DBs
NCBI-GeneID:
129989660
NCBI-ProteinID:
XP_055954065
LinkDB
All DBs
Position
2:complement(98189919..98250686)
Genome browser
AA seq
1441 aa
AA seq
DB search
MTRKNKIAVGEDFRIAIHIVVKNFRQNDEQKEYEFPSSLSATERAYVHRYTQSLGLKSKS
RGEGANRFLTVYKKEGSTIVQADAVFELGHISRRHTLSLLQRFPITARERQELLPPTERD
RILGQELFILAVRDVNRNIGRLGSGIPMVPPRKCDNEFTAFRQTLPIWNCQEEIIQMITC
HQVVIISGETGSGKTTQVPQFIMDHCSMVGQPCRIICTQPRRIAAITVAERVALERDDKI
GQTIGYQVRLESRISPKTLLTFCTNGVLLRTLMGGDASVATVTHILVDELHERDRYSDFL
LIVLRDLILKFRNLKLVLMSASLDMQLFCKYFSNCPIIEVPGRAFEVKTFFLEDILKGTG
YTNPAMIKYIKDIEKQKSRKKLESWCSVLNSEAIANSADDAPSETGKGFYQDLGLDSLSL
HDIDNEREPTSHLTAAVDKVIEDVWVSGEDDFSYLMQLILSENVSVDYQHSETLVSPLML
AAGRGNIDVVEQLLVLGASIHIKSTNGWTAVDWAIQFGHKEIAELLTTNQWKTENSEQKS
NNALDGQLEIQEEDKLLLDAYTHSVDEEKIDHDLILCLLSRIYASHEEGAVLIFLPGYDD
IVTLRDRIISENETKPEIRVMLFTLHSQMQSSDQKRVFRPVLPGVRKVILSTNIAETSVT
INDVLFVIDCGKVKEKSYDSLTGVTHLKAGWISKASAIQRRGRAGRCRPGLCYHLYSRAR
FNSFQKFQVPEILRVPIHELCLQAKLLAPPNAPIADFLAKAPDPPPFMVTRNAVTLLKTI
DALDPWEELTELGLHLLDMPIEPRLGKMILYSVVLKCLDPVLTIVCCLAYRDPFILPSQP
AQKRSVAMAKRKFSCDTFSDHMVLLRAFQAWQKAKVEGHERTFCSRNFISHATMEMIVGM
RSQLLGQLRASGFIRPRGSGDIRDLNSNSEIWAVIKAALCAGTYPNLIRIDRDRQQLITQ
KESKVRFHHSSVLNKLPVSAKHSVAALRKQMMAEMPCDWLFYEEMMRTGSIAHAHCCTLV
TPITVALFAGPARLPLDALHEPDQARLEGYMEEGDSEDDSKYDNQKAMFKIDDWISFRVE
PEIARLVLQLRQKWHALFLKRMHAPTKGLTQADETVIRTIAGVLVAEDQALHLQQPIGIG
QRPRPLMSDYTSPVHLRKPMSASPNHRSPSYFNPNNLYHSSGLSCYSDEMPGMSNAATSP
SSYNSSFSSCSQQSSPMSMPFNPVQMSSKQEFSQPCVTNSRIRYFIIKANTSRVVEVSMA
KNIWAFTATTERKLMSAMKEGKEVILIFSIQGSGHFQGFARFTPHLSDQRPPEFSAANLG
TCYQIEWIKKANIPFQSTRHLQNAWNENRKVQISRDGQELEPSVGESLCKLIVKGQPVFT
ADSMKSSKRNMVYSRENFSDSSPLTRSQMQWDQNLPSSSSWKQKKPRRRNRAKKSQTETK
G
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgactaggaaaaataaaatagccgtaggagaagattttcgcattgcaattcatatagtt
gtcaaaaactttcgtcaaaatgacgaacagaaagaatatgaatttccttcttcactaagt
gcaactgaaagagcctatgtacatcgttatactcaaagcttaggattaaagtctaaaagt
cgaggggaaggagcaaatagatttcttactgtgtataaaaaagaaggttctacaattgtg
caggcagatgcagtttttgagttgggacatatttcacgtagacatactctgtctttatta
caaagattccctatcactgctagagaaagacaagaacttcttcctcctactgaaagggat
cgcattttaggacaagaattatttatcctagcagttcgagatgtgaatcgtaacatagga
agacttggtagtggtattcctatggttcccccgcgcaaatgtgataatgaatttactgct
tttcgtcagactttaccaatatggaattgtcaggaagagatcatacaaatgataacttgc
caccaagttgtaatcatttctggtgaaacaggaagtggaaaaacaacccaggtcccacag
tttataatggatcattgtagtatggttggtcagccttgtcgcataatatgtacacagcct
cgaagaatagcagctataacggttgctgaaagagttgctcttgaaagagatgataaaatt
ggccaaactattgggtatcaagtacgtctagagagcagaatatcaccaaaaacattgctt
acattttgtactaatggtgtacttttacgcacacttatgggtggagatgcatcagtagca
acagtaactcatatacttgtggatgaacttcatgaaagagatcgatatagtgatttctta
ttaattgttttgagagatttgattttaaaatttcgaaatctaaaactcgtactcatgtcg
gcatccttagatatgcagttattttgcaagtatttcagcaactgccctattattgaagtc
ccaggtagagcttttgaagttaaaacatttttccttgaagatattttaaaaggaactgga
tatactaatcctgccatgataaaatatataaaagatattgaaaaacagaaatcaaggaaa
aaattggaatcatggtgttctgtcctaaattctgaagcaattgctaattctgctgatgat
gcaccatctgaaacaggaaaaggcttttatcaagatcttggcttagatagtctttcgttg
catgacattgacaatgaaagagaacctacctcacatttaacagcagctgtggataaagtt
attgaagatgtttgggtgtctggagaggatgatttttcttatttaatgcagttgatattg
tctgagaatgtatcagtggattatcaacacagtgaaacacttgtaagtccattaatgcta
gcagctggtagaggtaatatagatgttgttgaacaattgttagttcttggtgcaagcatt
catattaaatctaccaatggatggactgctgttgattgggctattcaatttggtcacaag
gaaattgctgaacttctcactactaatcaatggaaaactgaaaattcagaacagaaatca
aataatgctcttgatggacagttagaaattcaagaagaagacaaattacttttggatgct
tatacccatagtgtagatgaagaaaaaattgaccatgacttaattttatgcctcctttct
cgtatatatgccagtcacgaagaaggtgctgtactaatatttctcccaggatatgatgac
attgtaactcttagagatagaataattagtgaaaatgaaactaagcctgaaatcagagtc
atgctgtttactctccattcacaaatgcaaagctcagatcaaaaacgtgtattcagacca
gtcctaccaggagtacgaaaagtaatactatcaaccaatatagcagaaaccagtgttact
attaatgatgtattatttgttattgattgtggtaaagttaaagaaaaatcttatgattca
ttgactggagttactcatttaaaagctggatggatatcaaaagcaagtgctattcagcgc
agaggcagagctggacgctgtcgaccaggtctttgttatcatttgtatagcagagctcga
tttaatagtttccaaaaattccaagttcctgaaattctcagagttcccattcatgaactg
tgcttacaagcgaaacttcttgctcctcccaatgcacctatagctgatttcttggctaaa
gctccagatccaccaccttttatggtgaccaggaatgcagttactctgttaaaaaccata
gatgctcttgatccttgggaagaactcacagaattaggtcttcatcttttagatatgcct
atagaacctcgattaggaaagatgattctttattctgtagttttaaaatgtttagatcca
gttttgacaattgtatgctgcttagcatatcgggatccttttatccttccttctcaacca
gctcaaaaaagatctgttgcaatggctaaaagaaaattttcctgtgatacctttagtgat
catatggttttgttaagagcctttcaggcatggcagaaagctaaggtagagggccacgaa
agaaccttttgctctagaaattttatttctcatgcaacaatggaaatgattgttggaatg
aggtcacagctgcttggccaactcagagcttcaggttttattagacccagaggaagtggt
gatatccgtgacttaaatagcaattctgaaatttgggctgttattaaagcagctctttgt
gctggtacatatccaaatttaatccgtatcgacagagatcgccaacaactcataacacag
aaagaaagcaaagttagatttcatcattcatctgttttaaacaaattaccagtttctgct
aagcattcagttgctgctttgcgtaagcagatgatggcagaaatgccatgtgattggtta
ttttatgaagaaatgatgcgtactggaagtatagcccatgcacattgttgtacacttgtg
acaccaatcactgttgcattgtttgctggacctgctaggcttcctcttgatgctctgcat
gaacctgatcaagctcgtttagaaggctatatggaggaaggtgacagtgaagatgattct
aaatatgacaaccagaaggcgatgttcaaaatagatgattggatttcatttagggtagaa
cctgagattgctcgtctagtcttacagcttcgtcagaaatggcatgcactgttcttaaag
cgcatgcatgctccaacaaaaggcttaactcaggcagatgagactgtaattcgtacaatt
gctggtgtactagtagcagaagatcaagcactgcatttacagcaacctattggtattggt
cagaggccaagacctttaatgtctgactacacatctcctgttcacctaagaaaaccaatg
tcagctagtccaaaccacagaagtcccagttattttaatccaaataatctgtatcattca
tctggcttatcatgttattccgatgaaatgccaggcatgtctaatgctgccacatctcct
tcaagttataattcttcatttagtagctgtagtcagcaaagcagtccaatgtccatgcct
ttcaatccagttcaaatgtcttcaaagcaagaattttctcagccttgtgtcactaattcc
agaattcgatattttattataaaagcaaatacttcaagagttgtggaagtttcaatggca
aagaatatttgggcatttacagctacaacagaacggaaattaatgtcagctatgaaagaa
ggaaaagaagttattttaatattttcgatacaaggaagtgggcattttcaaggatttgct
cgttttacacctcatctttcagaccaacgtcctcctgaattcagtgcagctaatcttgga
acatgttatcagattgaatggattaaaaaagcgaatatcccttttcaaagtactcgacat
ctacaaaatgcttggaatgaaaatagaaaagttcagatatcacgagatgggcaggaacta
gaaccaagtgttggtgaatccttgtgcaaattgatagtaaaagggcaacctgttttcaca
gcagatagtatgaagtctagtaagaggaatatggtatatagcagagaaaatttttctgat
tcttctcctctaaccagaagtcaaatgcagtgggatcaaaatctgccttcttcctcatcg
tggaagcaaaaaaagccacgaaggagaaatcgtgctaaaaaatctcaaacggaaactaaa
ggatag
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integrated database retrieval system
