Actinacidiphila bryophytorum: NYE86_00030
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Entry
NYE86_00030 CDS
T08584
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
abry
Actinacidiphila bryophytorum
Brite
KEGG Orthology (KO) [BR:
abry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abry03032
]
NYE86_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
abry03400
]
NYE86_00030 (gyrB)
Enzymes [BR:
abry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NYE86_00030 (gyrB)
DNA replication proteins [BR:
abry03032
]
Prokaryotic type
DNA Topoisomerases
NYE86_00030 (gyrB)
DNA repair and recombination proteins [BR:
abry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NYE86_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
UWE13548
LinkDB
All DBs
Position
6889..8889
Genome browser
AA seq
666 aa
AA seq
DB search
MLCQKGRFVADSGNPNENSSKSYDASAITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEV
VDNSVDEAMAGHADTIDVTILADGGVRVVDNGRGIPVGIVPSEGKPAVEVVLTVLHAGGK
FGGGGYAVSGGLHGVGVSVVNALSTRVAVEVRTEGHRWTQDYKLGVPTAPLAKNEAVGET
GTSVTFWADPDIFETTEYSFETLSRRFQEMAFLNKGLRISLTDERADHVDEEGKPLAVTY
HYEGGLVDYVKYLNSRKGELIHPTVIDIEAEDKERLLSVEVAMQWNTQYSEGVYSFANTI
HTHEGGTHEEGFRAALTGLVNRYARDKKLLREKDDNLTGEDIREGLTAIISVKLGEPQFE
GQTKTKLGNTEAKTFVQKVVHEHLTDWLDRNPNEASDIIRKSIQAATARVAARKARDLTR
RKGLLESASLPGKLSDCQSNDPTKCEIFIVEGDSAGGSAKSGRNPQYQAILPIRGKILNV
EKARIDKILQNTEIQALISAFGTGVHEDFDIAKLRYHKIILMADADVDGQHINTLLLTFL
FRFMRPLVEAGHVYLSRPPLYKIKWGRDDFEYAYSDRERDALVELGKQSGKRIREDSIQR
FKGLGEMNAEELRVTTMDIDHRVLGQVTLDDAAQADDLFSVLMGEDVEARRSFIQRNAKD
VRFLDI
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaactccagc
aagtcctacgacgccagtgcgatcaccgtgctggaaggccttgaggcggtgcgcaagcgc
cccggtatgtacatcggttccaccggtgagcggggcctgcaccacctggtccaggaggtc
gtggacaactccgtcgacgaggcgatggccggccatgccgacaccatcgacgtcacgatc
ctggcggacggcggtgtgcgcgtcgtcgacaacggccgcggcatcccggtcggcatcgtc
ccctccgagggcaagccggccgtcgaggtggtgctgaccgtgctgcacgcgggcggcaag
ttcggcggcggcgggtacgcggtctccggcggtctgcacggcgtcggcgtctccgtggtg
aacgcgctgtccacgcgcgtcgccgtcgaggtccgcaccgagggccaccgctggacgcag
gactacaagctgggtgtgccgaccgcgccgctggccaagaacgaggcggtcggggagacc
ggcacctcggtcaccttctgggccgacccggacatcttcgagaccaccgagtactccttc
gagacgctctcgcggcgcttccaggagatggccttcctcaacaagggcctgcggatctcg
ctgaccgacgagcgcgccgaccacgtggacgaggagggcaagccgctcgccgtcacgtac
cactacgagggcggcctcgtggactacgtgaagtacctgaactcgcgcaagggcgagctg
atccaccccaccgtcatcgacatcgaggcggaggacaaggagcggctgctgtccgtcgag
gtcgcgatgcagtggaacacgcagtacagcgagggtgtctacagcttcgccaacaccatc
cacacccacgagggcggcacccacgaggagggcttccgcgcggcgctgaccggcctggtc
aaccgctacgcgcgggacaagaagctgctccgcgagaaggacgacaacctcaccggcgag
gacatccgcgagggcctgaccgcgatcatctcggtcaagctcggcgagccgcagttcgag
ggccagacgaagaccaagctgggcaacacggaggccaagaccttcgtgcagaaggtcgtg
cacgagcacctgaccgactggctggaccgcaaccccaacgaggcctctgacatcatccgc
aagtcgatccaggcggccaccgcccgggtcgcggcccgcaaggcgcgcgacctgacccgc
cgcaagggcctgctggagtcggcgtcgctgcccggcaagctcagcgactgccagtccaac
gacccgacgaagtgcgagatcttcatcgtcgagggcgactcggccggcggctccgcgaag
tccggccgcaacccgcagtaccaggcgatcctgccgatccgcggcaagatcctcaacgtg
gagaaggccaggatcgacaagatcctgcagaacaccgagatccaggcgctgatctcggcc
ttcggcaccggggtccacgaggacttcgacatcgccaagctgcggtatcacaagatcatc
ctgatggcggacgccgacgtcgacggccagcacatcaacaccctgctgctgaccttcctc
ttccgcttcatgcgcccgctggtcgaggccggacacgtctacctgtcccggccgccgctg
tacaagatcaagtggggccgcgacgacttcgagtacgcctactccgaccgcgagcgcgac
gcgctggtggagctgggcaagcagagcggcaagcggatccgcgaggactcgatccagcgc
ttcaagggcctgggcgagatgaacgcggaggagctgcgggtcaccacgatggacatcgac
caccgggtgctcggccaggtcacgctggacgacgcggcccaggccgacgacctgttctcg
gtgctgatgggcgaggacgtggaagcccgccggtcgttcatccagcgcaatgccaaggac
gtccggttcctggacatctga
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