Actinacidiphila bryophytorum: NYE86_06310
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Entry
NYE86_06310 CDS
T08584
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
abry
Actinacidiphila bryophytorum
Pathway
abry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NYE86_06310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abry03400
]
NYE86_06310
Enzymes [BR:
abry01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NYE86_06310
DNA repair and recombination proteins [BR:
abry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NYE86_06310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
AAA_22
PhoH
Helicase_RecD
PIF1
TraI_hel_assoc_N
AAA_16
NPHP3_N
nSTAND3
HTH_IclR
DEAD
UvrD-helicase
TrwB_AAD_bind
AAA
SLFN-g3_helicase
UvrD_C
DAP3
Motif
Other DBs
NCBI-ProteinID:
UWE08378
LinkDB
All DBs
Position
1489918..1492137
Genome browser
AA seq
739 aa
AA seq
DB search
MPDGGLAVLEGVLERITYANEDNGYTVARVDTGRGSGDLLTVVGALLGAQPGESLRMHGR
WGSHPQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPRIAERIVDHFGTGTLEVIE
GEPKRLIEVPGLGPKRTKLIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKGYGDASIS
VVKNQPYRLAAEVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQATDSGNCFLPQE
RLIADAVKLLQVDTGLVIDCLGELADEEGVVRESVPAPDGDGEPVTAVYLVPFHRAEISL
AAQVLRLLKGPEDRLPAFRDVDWDKALTWLAGQTGADLAPEQQQAVRLALTEKVAVLTGG
PGCGKSFTVRSVVTLARAKKAKVVLAAPTGRAAKRLSELTGTEASTVHRLLELKPGGDAA
YDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSVGAGEVLRDLL
ADGGPVPAVRLTRIFRQAQQSGVVTNAHRINSGLPPVTQGLPDFFLFAEEDSEEAGRLTV
DVVARRIPARFGLDPRRDVQVLTPMHRGPAGAGALNGLLQQAVTPARPDLPERRFGGRTF
RVGDKVTQIRNNYDKGANGVFNGTVGVVTALDAVEQRLTVRTDEDEEIGYDFDELDELAH
AYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRRAIGQAVRT
VSAGRRFTALDHRLSVGAK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccggacggtgggctcgcggtgctggaaggtgtcctggagcggatcacctacgccaac
gaggacaacggctacacggtcgcgcgggtggacaccggccgcggttctggcgacctgctg
acggtcgtcggcgccctgctcggcgcccagccgggcgagtccctgcggatgcacggccgc
tggggctcccacccgcagtacggcaagcagttcaccgtggagaactacaccaccgtgctg
cccgccaccatccagggcatacgccgctacctcggctccggcctgatcaagggcatcggg
ccgcgcatcgccgagcgcatcgtggaccacttcggcaccggcaccctggaggtcatcgag
ggcgagccgaagcgcctgatcgaggttccgggcctcgggccgaagcgcaccaagctgatc
gccgccgcctgggaggagcagaaggcgatcaaggaggtgatggtcttcctgcagggggtg
ggcgtatcgacgtccatcgcggtgcggatctacaaggggtacggcgacgcatcgatctcc
gtggtcaagaaccagccctaccggctggcggccgaggtgtggggcatcggcttcctgacc
gccgaccggatcgcccaggccgtcgggataccgcacgacagccctgagcgggtgaaggcc
gggctgcagtacgcgctctcgcaggcgaccgacagcgggaactgcttcctgccccaggag
cggctgatcgccgacgcggtcaagctgctgcaggtggacaccggcctggtgatcgactgc
ctcggcgagctggccgacgaggagggcgtggtccgcgagagcgtgccggcgcccgacggg
gacggcgagccggtcaccgccgtctacctggtgcccttccaccgggccgagatctcgctg
gcggcgcaggtgctgcggctgctgaagggaccggaggaccggctgcccgccttccgggac
gtcgactgggacaaggcgctgacctggctggccgggcagaccggcgccgacctggccccc
gagcagcagcaggcggtgcggctcgcgctgaccgagaaggtcgccgtcctcaccggagga
cccggctgcggcaagtccttcacggtgcgctcggtggtcacgctggccagggcgaagaag
gccaaggtggtgctggccgccccgacgggccgggccgccaagcggctgtcggagctgacc
ggcaccgaggcgtccaccgtgcaccggctgctggagctgaaacccggcggggacgcggcc
tacgaccgggaccggccgctcgacgcggacctggtggtggtcgacgaggcctccatgctg
gacctgctgctggccaacaagctggtcaaggcggtgccgccgggcgcccacctgctcttc
gtgggggacgtggaccagctgccgagcgtcggggcgggcgaggtgctgcgcgacctgctc
gcggacggcggcccggtccccgcggtgcggctgacccggatcttccggcaggcccagcag
tccggggtggtcaccaacgcccaccggatcaactccgggctgccaccggtcacccagggg
ctccccgacttcttcctcttcgcagaggaggactccgaggaggcgggccggctcaccgtg
gacgtggtcgcgcgccgcatccccgccaggttcggcctcgacccgcggcgggacgtccag
gtgctgacccccatgcaccgcggccccgcgggcgccggcgccctcaacggcctgctccag
caggccgtcaccccggcccgccccgacctgcccgagcgcaggttcggcggcaggaccttc
cgggtgggcgacaaggtcacccagatccgcaacaactacgacaagggcgccaacggcgtc
ttcaacggcaccgtgggcgtggtcaccgcgctggacgcggtcgagcagcggctcaccgtg
cgcacggacgaggacgaggagatcgggtacgacttcgacgagctggacgagctggcccac
gcctacgcggtgaccatccaccgctcgcagggcagcgagtatccggcggtggtgatcccg
gtcaccacgggggcctggatgatgctccagcgcaacctgctctacacggctgtgaccagg
gcgaagcggctggtcgtcctggtcggctcgcggcgggcgatcggccaggcggtgcgcacc
gtctcggcgggccggcgcttcacggctctcgaccaccggctctccgtgggcgcaaaatag
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