Actinacidiphila bryophytorum: NYE86_07380
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Entry
NYE86_07380 CDS
T08584
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
abry
Actinacidiphila bryophytorum
Pathway
abry02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
abry00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NYE86_07380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abry03021
]
NYE86_07380
Transcription machinery [BR:
abry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NYE86_07380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
Motif
Other DBs
NCBI-ProteinID:
UWE13657
LinkDB
All DBs
Position
1746177..1747361
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AA seq
394 aa
AA seq
DB search
MGSLPSLLRALSEPNVALTAEVASVQTQTKTAHVRVPEQRAEPEPPLDEAPPFDPADDAV
PDPVPDPATDPVADPAAAEAAVPPRPRADPAGPSADLFRQYLREIGRIPLLTAEQEVELA
RKVEAGLFAEEKLTAFPDLASQLAVDLDCIVVQGRMAKRRLIEANLRLVVSVAKRYVGRG
LTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVE
LINRVIRVQRRLLQERGYEPGAEEVAAQLDITPERVCEVLRLAQEPVSLHAPVGEEDDVA
LGDLIEDGDAASPVESAAFMLLREHLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGS
LFGVTRERIRQIESKTLNKLRDHAFADQLRGYLE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atcggctccctcccgagccttctccgagccctctcagagcccaatgtcgcgctcaccgcg
gaggtcgcttccgtgcagacgcaaacgaaaacagctcacgtccgggtgccggagcagcgc
gcggagcccgaaccaccgctcgacgaggcgccgcccttcgacccggccgacgacgccgta
cccgatccggtacccgatcccgccaccgatcccgtcgccgaccctgccgccgcggaagcg
gcggtcccgccgcgcccgcgcgcggacccggcaggcccgtcagccgacctcttccggcag
tatctgcgcgagatcggccgtatcccgctgctcaccgcggagcaggaggtggagctggcc
cgcaaggtcgaagcggggctcttcgccgaggagaagctgaccgccttccccgacctggcc
tcgcagctcgcggtcgacctcgactgcatcgtggtgcagggccggatggccaagcggcgg
ctcatcgaggcgaacctgcggctggtcgtgtcggtggcgaaacgttacgtcggacgcggt
ctgaccatgctcgacctggtccaggagggcaacctcggactgatcagggcggtcgagaag
ttcgactacgcccgcggctacaagttctcgacatatgccacctggtggatccgccaggcc
atgtcgcgcgcgctcgcggaccaggcccgtacgatccgggtccccgtgcacgtcgtggag
ctgatcaaccgggtcatccgggtccagcgccggctgctgcaggaacgcggctacgagccg
ggcgccgaggaggtcgcggcccagctcgacatcaccccggagcgggtgtgcgaggtcctg
cgccttgcccaggagccggtgtcgctgcacgcgccggtcggcgaggaggacgacgtcgca
ctcggcgacctcatcgaggacggcgacgccgcctccccggtcgagtcggcggccttcatg
ctgctgcgcgagcacctcgaagcggtgctgtcgaccctcggcgagcgcgaacgcaaggtc
gtccagctgcgctacggcctcgccgacggccgcccccgcaccctggaggagatcggcagc
ctcttcggcgtgacccgcgagcgcatccgccagatcgagtccaagaccctcaacaagctc
cgcgaccacgccttcgccgaccagctccgcggctacctcgaatag
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