Actinacidiphila bryophytorum: NYE86_09920
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Entry
NYE86_09920 CDS
T08584
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
abry
Actinacidiphila bryophytorum
Pathway
abry03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NYE86_09920 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abry03400
]
NYE86_09920 (uvrA)
DNA repair and recombination proteins [BR:
abry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYE86_09920 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NYE86_09920 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_16
AAA_23
nSTAND1
AAA_33
AAA_25
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
UWE09009
LinkDB
All DBs
Position
2319533..2322493
Genome browser
AA seq
986 aa
AA seq
DB search
MADRLTVRGAREHNLKNVSLELPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPISRQSPQAIVDRVLELEEGSRFQVLSPLVRERKGEFVDLFGDLQTKGYSRARV
DGATVQLTDPPKLKKQEKHTIEVVVDRLTVKDSAKRRLTDSVETALGLSGGMVILDFVDL
PEDDPQRERMFSEHLYCPYDDLSFEELEPRSFSFNSPFGACPDCTGIGSRMEVDPELIVP
DDQKSLQEGAIAPWTGGMSKGYFERLVDGLATELGFRTDIPFAGLPARAKKALLYGHKSE
VRVAYKNRYGRDRVYNAHFEGAVPFVKRRHQDSESDSSRERFEGYMREVPCPTCEGSRLK
PIVLAVTVQDRSIADVSAMSISDCAEFLGAMKLDARDRKIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DLGNTLIVVEHDEDTIKTADWVVDIGPGAGEHGGKVVHSGSLKELLANDESLTGQYLAGK
RSIPTPDIRRPVDRKRRLTVHGAREHNLQDIDVSFPLGVLTAVTGVSGSGKSTLVNDILY
THLARELNGARSVPGRHTRVEGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRRLFA
ETMEAKVRGYLPGRFSFNVKGGRCENCAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIAEVLDMPIEEALDFFEAVPTIARHLRTLHEVGLGYVRLGQSAPTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLIKVLSGLVDKGNSVIVIEHNLDVIK
TADWVVDMGPEGGSGGGLVVAEGTPEQIAGIPASHTGKFLRDVLGAERISDAAVPAPRKR
AAAKPAAKAAGAATKAAAPRKKAAKA
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
gtggccgatcgactcaccgtccgtggcgctcgcgagcacaacctgaagaacgtctcgctt
gagctgccccgggactcgctcatcgtgttcaccggcctgtccggttccggcaagtcctcg
ctggcgttcgacacgatcttcgccgagggccagcgccggtacgtcgagtcgctctcgtcc
tacgcgcggcagttcctcggccagatggacaagccggacgtcgacttcatcgagggcctg
tcgcccgccgtctccatcgaccagaagtccacctcgcgcaacccgcgctccaccgtcggc
accatcaccgaggtctacgactacctgcggctgctcttcgccaggatcggcaagccgcac
tgccccgagtgcggccggccgatctcccggcagtcgccgcaggccatcgtggaccgggtg
ctcgagctggaggagggcagccgcttccaggtgctctcgccgctggtgcgcgagcgcaag
ggcgagttcgtcgacctcttcggcgacctgcagaccaagggctacagccgggccagggtg
gacggcgcgaccgtccagctcaccgacccgccgaagctgaagaagcaggagaagcacacc
atcgaggtggtcgtggaccgcctgacggtcaaggactcggccaagcgccggctcaccgac
tcggtggagaccgcgcttgggctgtccggcggcatggtcatcctggacttcgtggacctg
ccggaggacgacccgcagcgcgagcggatgttctccgagcacctgtactgcccctacgac
gacctgtccttcgaggagctggagccgcgctccttctccttcaactcgcccttcggcgcc
tgccccgactgcaccggcatcggctcgcgcatggaggtcgacccggagctgatcgtcccc
gacgaccagaagtcgctgcaggagggcgccatcgcgccctggaccggcggcatgtccaag
gggtacttcgagcggctggtcgacggcctggccaccgagctgggcttccgcaccgacatc
cccttcgcggggctgccggcccgggccaagaaggcgctgctctacggccacaagtccgag
gtccgcgtcgcgtacaagaaccgctacggccgcgaccgggtgtacaacgcgcacttcgag
ggcgcggtgccgttcgtcaagcgccgccaccaggactccgagagcgactccagccgggag
cgcttcgagggctacatgcgcgaggtgccctgccccacctgcgagggcagcaggctcaag
ccgatcgtgctcgcggtcaccgtgcaggaccgctcgatcgccgacgtctccgcgatgtcg
atcagcgactgcgccgagttcctgggcgcgatgaagctggacgcgcgcgaccgcaagatc
gccgagcgggtgctgaaggaggtcaacgagcggctgcgcttcctggtcgacgtcggcctc
gactacctctcgctcaaccgggccgccggcaccctgtccggcggcgaggcccagcgcatc
cggctcgccacccagatcggctccggcctggtcggcgtgctctacgtgctggacgagccg
tccatcgggctgcaccagcgcgacaaccaccggctgatcgagaccctggtgcggctgcgc
gacctgggcaacacgctgatcgtggtggagcacgacgaggacaccatcaagaccgccgac
tgggtcgtcgacatcggccctggcgcgggcgagcacggcggcaaggtcgtgcactccggg
tcgctcaaggagctgctggccaacgacgagtcgctgaccgggcagtacctggcgggcaag
cggtccatccccacccccgacatccgccgcccggtcgaccgcaagcggcggctgaccgtg
cacggcgcccgcgagcacaacctgcaggacatcgacgtgtccttcccgctgggcgtgctc
accgcggtcaccggtgtgtccggctcgggcaagtccaccctggtcaacgacatcctctac
acccacctggcccgcgagctgaacggcgcgcgcagcgtccccggccggcacacccgggtc
gagggcgacgacctggtggacaaggtcgtgcacgtcgaccagtcgccgatcggccgcacc
ccgcgctccaacccggcgacgtacaccggggtgttcgaccatgtgcggcggctgttcgcc
gagacgatggaggccaaggtccgcggctacctgcccggccgcttctcattcaacgtcaag
ggcggccgctgcgagaactgcgcgggcgacggcaccatcaagatcgagatgaacttcctg
cccgacgtgtacgtgccctgcgaggtctgccacggcgcccgctacaaccgggagaccctg
gaggtgcactacaagggcaagtccatcgccgaggtgctggacatgcccatcgaggaggcg
ctggacttcttcgaggcggtgcccaccatcgcccggcacctgcgcaccctgcacgaggtg
ggcctgggctacgtacggctcgggcagtccgcgccgacgctgtccggcggcgaggcgcag
cgcgtcaagctggcctcggaactgcagaagcgctccaccggccggaccgtctacgtactg
gacgagccgaccaccgggctgcacttcgaggacatcagcaagctcatcaaggtgctgtcg
ggcctggtcgacaagggcaactcggtgatcgtcatcgagcacaacctcgacgtcatcaag
accgccgactgggtcgtcgacatgggacccgagggcggcagcggcggcggcctggtcgtc
gccgagggcacccccgagcagatcgccggcatcccggccagccacaccggcaagttcctg
cgcgacgtcctgggcgccgagcggatcagcgacgcggcggtgcccgcgccccgcaagcgc
gcggcggccaaaccggccgccaaggccgcgggcgcggccacgaaggcggcggccccccgg
aagaaggccgccaaggcatag
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