Actinacidiphila bryophytorum: NYE86_16960
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Entry
NYE86_16960 CDS
T08584
Name
(GenBank) type I polyketide synthase
Organism
abry
Actinacidiphila bryophytorum
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
KAsynt_C_assoc
adh_short
CurL-like_PKS_C
RhiE-like_linker
PP-binding
adh_short_C2
Thiolase_N
SpnB_Rossmann
Epimerase
Motif
Other DBs
NCBI-ProteinID:
UWE10235
LinkDB
All DBs
Position
complement(3950888..3955549)
Genome browser
AA seq
1553 aa
AA seq
DB search
MNQPTAADGELRTLLAQAGRTISQLRTMVEKQRGALRAPIAIVGIGCRFPGGADSPEAMW
RMLSAGVDAIGPFPEDRWDTAPYFDPDPETPATAYVLDGGFLDRVDTFDAQLFGIAPAEA
TGMDPQQRIALEVAWQALEDAGLPPDGLDGSRTGVFMGASTGDYVRMRQQFGAPEGIDGY
QILGENSFIAGRIAHTFGLRGPAQVVDTACSSSLLAVRQACQSLRLGETDLALAGGVNVI
LSPYGFVLVSKAGAVARDGRCKAFDAAADGYGRGEGCGIVVLKRLSDALADGDRVLAVIR
GGAVNHDGRASGISVPSAQAQQEVIRAALEDAGLTSDRVGYVEAHGTGTVLGDPIELRSL
EQVLGAGRPDGRPLLVGSVKTNIGHLEAAAGIAGLIKAVLAVRHGEIPASLHFRTPNPNV
AWDRLHVAVAAEHTAWPSDGQPRVAGLSSFGASGTNVHLLVEEPPAAVAEDPDVPARPAE
LVVASARGEDALRALAGTWADHLDSHPDTPLPAVARTAATGRAAQQVRTAFTAADLPELG
ARLRAFADGEGGTAPRRALSAHRARTAFLFPGQGAQFEGMGRQLYDAEPVFRDALDTCAA
LLADGGERPLLDVVFDPDGSDLRRTAWTQPALFAVEYALAELWRSWGVRPAALIGHSVGE
YTAVCVAGAVELPDALRLIALRGRLMDGVTTPGAMLAVPLGEQAALRAVGARTDRVSLAA
VNGPQDTVLSGAADAIEEIAAELAADGITGRRLAVSHAFHSPLLDPVLRPLEEAAATVEF
REPRIPVYSNLTGEKLDRAALADPGYWVRHARQPVRFHQGMLALAGATGAGAFVEVGPGR
TLLGLGGRILPDQDLLWLPSLRRGRPESAQVLDSLGQLFAWGAPVDLAALHGTGTPRHVP
LPTYAFQRRALAFPLAAAGATGLAGPGTRAAAGDPAEDTLRYTVRWEQAPTAAAGAEVPA
GRTLLLADSGGVAEDLAAGLRARGGTVVTARLVPAGGKADSSEAVPAGDAARLRALLAAH
APLDRVVHLASLDVPAGDDATTADLADARVTGPETAIHLLQALVDGAGGNPEGPPRLWLV
TRGAQAAGEKDETGGLAGGMLVGLGKVAALEQPALWGGSIDLDPAGGGTDALADELLRPG
DEDEVALRAGERLVPRLVPEPAGAAAPPVLRADASYLITGGLGGLGLTLAGWLADRGARH
VVLTGRSGLQPREEWDVPGGTGSRAGGPSAATAARVRAVRDLEGRGVQVTVARADVTDEA
AMREVFRAAAAAGRPVRGVVHAAGLAGAQNIDQADPAELHAVLRPKVEGAWTLHRLLADA
EPDFLVLMSSIASVWGSAHLAAYAAANRFLDGLAAHRRATGRPALSISWGPWNVASGLGG
DDLLARLEALGLRALDARTGLDQLGGLLAGDHVHAVVSGADWDTLKPLLESRRARPLLAG
IAAAAPGGDGAAPSALLAGVLAAPADRREGLLDAYVRDALADQLGVPRAEITDDIDLLQM
GLDSLGVSQLITRYRKDLALRLEPRPFFEVPAEGWGRLLGDEVARQHPAPQEP
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcccaccgccgccgacggcgagctgcgaaccctgctggcccaggccggccgg
accatctcccagctgcgcacgatggtcgagaagcagcggggcgccctccgcgccccgatc
gcgatcgtgggcatcggctgccgcttccccggcggcgcggactctcccgaggccatgtgg
cggatgctcagcgccggcgtggacgccatcggccccttccccgaggaccgttgggacacc
gcgccctacttcgacccggacccggagacacccgccaccgcctacgtcctggacggcggc
ttcctcgaccgcgtcgacaccttcgacgcccagctcttcggtatcgcacccgccgaggcc
accggcatggacccgcagcagcgcatcgcgctcgaggtcgcctggcaggccctggaggac
gcggggctgccgcccgacggcctcgacgggtcgcgcaccggggtgttcatgggtgcaagc
accggcgactacgtgcgcatgcgccagcagttcggcgcgcccgagggcatcgacggctac
cagatcctcggcgagaacagcttcatcgccggccgcatcgcccacaccttcgggctgcgc
ggccctgcgcaggtcgtcgacaccgcctgctcgtcctcgctgctcgcggtccgccaggcg
tgccagtcgctgcggctcggcgagaccgacctcgccctggccggcggcgtgaacgtcatc
ctgtcgccctacggcttcgtgctggtcagcaaggccggggcggtcgcccgcgacgggcgc
tgcaaggcgttcgacgccgccgcggacggctacggccgcggcgagggctgcggcatcgtg
gtgctcaagcggctgtccgacgcgctcgccgacggcgaccgggtgctggccgtgatccgc
ggcggcgccgtcaaccacgacgggcgcgccagcggcatctccgtacccagcgcccaggcc
cagcaggaggtgatcagggccgccctggaggacgcagggctgacgtccgaccgggtcggc
tacgtggaggcccacggcaccgggaccgtcctcggcgaccccatcgaactgcgcagtctg
gagcaagtcctgggcgcggggcggccggacgggcggccgctgctcgtcggctcggtcaag
accaacatcggccacctggaggccgcggccggcatcgccgggctgatcaaggcggtgctc
gcggtccggcacggcgagatcccggcgagcctgcacttcaggacccccaaccccaacgtc
gcctgggaccggctgcacgtcgcggtcgccgccgagcacaccgcctggccgtccgacggg
cagccgcgggtggccgggctgagctccttcggggccagcggcaccaacgtccacctgctg
gtcgaggaaccccccgcagccgtggccgaggacccggacgtccccgcccgcccggccgaa
ctcgtcgtcgcctccgcccggggcgaggacgcgctgcgggcgctggccggcacgtgggcc
gaccacctcgactcccacccggacacgccgctgcccgccgtcgcccgcaccgccgccacc
ggacgggccgcccagcaggtccgtaccgcgttcaccgccgcggacctccccgaactcggc
gcacgcctcagggcgttcgccgacggcgagggcggcacggcgccgcggcgcgcgctgagc
gcgcaccgcgccaggaccgcgttcctcttccccggccagggcgcccagttcgagggcatg
ggccggcaactgtacgacgccgagccggtcttccgcgacgcgctcgacacctgcgccgcc
ctgcttgcggacggcggtgaacggccgctgctggacgtggtgttcgacccggacggcagc
gacctgcgacgcaccgcgtggacgcagcctgcgctgttcgcggtggagtacgccctcgcc
gagctgtggcgctcctggggcgtgcggccggccgccctgatcgggcacagcgtgggggag
tacacggcggtgtgcgtcgccggcgccgtcgaactccccgacgcgctgcggctgatcgcg
ttgcgcggccggctgatggacggtgtcacgacccccggcgcgatgctcgccgtaccgctc
ggcgagcaggccgcgctgcgcgccgtcggcgcacgcaccgaccgggtgtcgctcgccgcc
gtcaacggcccccaggacacggtgctgtcaggcgccgccgacgccatcgaggagatcgcc
gcagaactcgccgccgacggcatcacgggccgccgcctcgccgtctcgcacgccttccac
tcgccgctgctcgacccggtgctgcgcccgctcgaagaggccgccgcgaccgtggagttc
cgcgagccgcggatcccggtctactccaacctcaccggcgagaagctggaccgcgccgcc
ctcgccgaccccggctactgggtccggcacgcccggcagccggtccgcttccaccagggc
atgctcgcgctcgccggggccacaggggccggcgcgttcgtcgaggtcggccccggccgc
accctgctgggactcggcggccgcatcctgcccgaccaggacctgctgtggctgccctcg
ctgcgccgcggccggccggagagcgcgcaggtcctcgacagcctcggtcagctgttcgcc
tggggcgcacccgtcgacctcgcggccctgcacggcacgggaaccccgcgccacgtcccc
ctgcccacctacgccttccagcgccgcgcgctggccttcccgctcgccgcggccggtgcc
accggactcgcggggccgggcacccgcgccgccgccggggacccggccgaggacaccctg
cgctacaccgtcaggtgggagcaggccccgaccgccgcggcaggcgccgaggtaccggcc
ggccgcaccctgctgctcgccgactccggcggcgtcgcggaggacctggccgccggcctc
agggcgcgcggcggcaccgtcgtcaccgcccggctcgtccccgcgggagggaaggcggac
agttccgaggcggtgcccgccggcgacgccgcgcggctgcgcgccctgctcgccgcccac
gcgccgctggaccgcgtggtgcacctggcctcgctcgacgtgcccgcgggcgacgacgcc
accaccgccgacctcgcggacgcccgcgtcaccggcccggagaccgcgatccacctgctt
caggcgctcgtcgacggcgccggcggcaaccccgaaggcccgccgcggctgtggctggtc
acccggggcgcccaggccgcgggcgagaaggacgagaccggcggcctggccggcggcatg
ctcgtcggcctcggcaaggtggccgcgctggagcagcccgcgctgtggggaggcagcatc
gacctcgacccggccggcggcggaaccgacgccctggccgacgagttgctgcggcccggc
gacgaggacgaggtcgcgctgcgcgccggcgaacgcctggtgccccggctcgtacccgag
ccggccggagccgccgcgccgcccgtgctgcgcgccgacgcctcgtacctgatcaccggc
ggcctcggcggcctgggcctgaccctggcgggctggctcgccgaccgcggcgcccgccac
gtcgtcctcaccgggcgctccggcctgcagccgcgcgaggagtgggacgtgccgggcggc
accggttcccgcgccggcgggccgtccgccgcgaccgccgcccgcgtgcgggccgtgcgc
gacctggaaggccgcggcgtgcaggtcaccgtcgcccgcgccgacgtcaccgacgaggcc
gcgatgcgcgaggtgttcagggccgcagccgcggccggccgtcccgtgcggggcgtcgtg
cacgccgcaggactcgccggagcgcagaacatcgaccaggccgaccccgcggaactgcac
gccgtactgcggccgaaggtcgagggcgcctggacgctgcaccggctgctggccgacgcg
gaaccggacttcctggtcctgatgtcgtccatcgcgtcggtgtggggctcggcccacctg
gccgcctacgccgccgccaaccgcttcctcgacggcctggccgcccaccgcagggccacc
ggccgccccgcactgagcatcagctggggcccgtggaacgtcgccagcggcctcggcggc
gacgacctgctggcccggctggaggccctcggcctgcgcgccctcgacgcccgcaccggg
ctggaccagctcggcgggctgctggccggcgaccacgtccacgccgtggtgtccggcgcc
gactgggacaccctcaagcccctgctggagtcgcgccgcgcccggccgctgctcgccggc
atcgcggccgccgcacccggcggcgacggcgccgcgccctccgcgctgctggccggcgtg
ctcgccgctcccgccgaccggcgcgagggcctgctggacgcctacgtgcgcgacgcgctc
gccgaccagctcggcgtgccccgcgccgagatcaccgacgacatcgacctgctgcagatg
ggcctcgactccctcggcgtcagccagctcatcacccgctaccgcaaggacctggcgctg
cgcctggaaccgcggcccttcttcgaggtgccggcggagggctgggggcggctgctcggc
gacgaggtggcccggcagcacccggcaccacaggagccctga
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