Actinacidiphila bryophytorum: NYE86_25655
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Entry
NYE86_25655 CDS
T08584
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
abry
Actinacidiphila bryophytorum
Brite
KEGG Orthology (KO) [BR:
abry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abry03032
]
NYE86_25655
03400 DNA repair and recombination proteins [BR:
abry03400
]
NYE86_25655
Enzymes [BR:
abry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NYE86_25655
DNA replication proteins [BR:
abry03032
]
Prokaryotic type
DNA Topoisomerases
NYE86_25655
DNA repair and recombination proteins [BR:
abry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NYE86_25655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
UWE11752
LinkDB
All DBs
Position
5965395..5967842
Genome browser
AA seq
815 aa
AA seq
DB search
MARRTTKTPPPDDGFEERILDIDVVDEMQASYLEYAYSVIYARALPDARDGMKPVHRRIV
YQMNEMGLRPDRAFVKCARVVGEVMGKLHPHGDASIYDAMVRMAQPFSQRLPLVDGHGNF
GSLDDLPAAMRYTEARMSGPAQLMVESIDEDTVDFAPNYDGQEQEPAVLPSAYPNLLVNG
ASGIAVGMATNMPPHNLGEVIAAARHLIRYPNADLDALMRHIPGPDLPTGGRIIGLSGIR
DAYETGRGTFKIRATVSVEDVTARRKGLVVTELPFTVGPEKVIAKIKDMVGAKKLQGIAD
VKDLTDREHGLRLVIEIKNGFNPEAVLEQLYKLTPMEDSFGINNVALVDGQPLTLGLREL
LEVYVDHRFEVVRRRSEFRRTKRRDRLHLVDGLLVALVDIDEVIAIIRASDNAAQAKERL
MERFGLSEIQTQYILDTPLRRLTRFDRIELEAERDKLTAEIAELTRILESDAELRKLVSA
ELAAVSKQYGTERRTVLLESAGAPVSAVPLEVADDPCRVLLSSTGLLARTSQLDEPGEGG
GRRVKHDVIVSAVPTTARADVGAVTSFGRLLRLTVIDLPMLPDTAGSPSLAGGAPLAEFL
SLEDGERVLCLTTLDESSPGLALGTEQGVVKRVVPDYPANKDDLEVIGLKDGDTVVGAVE
LRTGEEDLVFITDDAQLLRYPASQVRPQGRPAGGMAGVKLADGAKVISFTAVDPAADAVV
FTVARAEDTLDGAGEGTAKLTPFEQYPRKGRATGGVRCQRFLRGETGLLLAWAGAAPARA
ATAAGSPADLPPKDPRRDGSGVPLAKPVAVVAGPV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcacgacgaagaccccgccgcccgacgacggtttcgaggagcgcatcctc
gacatcgacgtcgtggacgagatgcaggcctcgtatcttgagtacgcctactcggtcatc
tacgcgcgcgccctgcccgacgcccgtgacggcatgaagccggtgcaccggcgcatcgtc
taccagatgaacgagatgggcctgcgccccgaccgcgccttcgtcaagtgcgcccgggtc
gtcggcgaggtcatgggcaagctgcacccgcacggcgacgcgtcgatctacgacgccatg
gtgcgcatggcgcagccgttctcgcagcgcctcccgctggtcgacgggcacggcaacttc
ggttcgcttgacgacctgccggccgcgatgcggtacaccgaggcccgcatgtcggggccc
gcccagctcatggtcgagtcgatcgacgaggacaccgtcgacttcgcgcccaactacgac
ggccaggagcaggagccggccgtcctgccgtcggcgtatccgaacctgctggtcaacggg
gcgtccgggatcgcggtcggcatggccaccaacatgccgccgcacaacctgggcgaggtc
atcgctgccgcccggcacctgatccgctaccccaacgcggacctggacgccctgatgcgg
cacatcccgggacccgacctgcccaccggcggccgcatcatcggcctgtccggcatcagg
gacgcctacgagaccggccgcggcaccttcaagatccgcgcgacggtctcggtggaggac
gtcaccgcccgccgcaagggcctggtcgtcacggaactgcccttcaccgtcggccccgag
aaggtcatcgccaagatcaaggacatggtcggcgcgaagaagctgcagggcatcgccgac
gtcaaggacctcaccgaccgcgagcacgggctgcggctggtcatcgagatcaagaacggc
ttcaaccccgaggccgtgctcgaacagctctacaagctcacgccgatggaggactccttc
ggcatcaacaacgtggcactggtcgacggccagccgctcaccctggggctgcgcgagctg
ctcgaggtctatgtcgaccaccgcttcgaggtggtgcggcggcgcagcgagttccgccgc
accaagcgccgcgaccggttgcacctggtcgacggcctgctggtggcgctggtcgacatc
gacgaggtcattgcgatcatccgggccagcgacaacgcggcgcaggccaaggagcgcctg
atggagcgcttcgggctgtccgagatccagacgcagtacatcctggacaccccgctgcgc
cggctgacccgcttcgaccgcatcgagctggaggccgagcgcgacaagctcaccgcggag
atcgccgagctgacccggatcctggagtccgacgccgagctgcgcaagctggtgtccgcc
gagctggccgcggtttccaagcagtacggcaccgagcgccgcacggtactgctggagtcg
gcaggcgcgccggtctccgccgtgccgctggaggtcgccgacgacccctgccgggtgctg
ctgtcctcgaccgggctgctggcccgcacctcccagctggacgagcccggcgagggcggc
ggccggcgggtcaagcacgacgtgatcgtctccgcggtgcccaccacggcccgcgcggac
gtcggcgcggtcacctccttcgggcggctgctgcggctgacggtgatcgacctgccgatg
ctgccggacaccgcggggtcgccctcgctggccggcggcgcgccgctggcggagttcctg
tcgctggaggacggcgagcgggtgctgtgcctgaccacgctggacgagtcctcaccgggt
ctcgcgctcggcaccgagcagggcgtggtcaagcgcgtcgtgcccgactacccggcgaac
aaggacgacctggaggtcatcggcctcaaggacggcgacaccgtggtcggcgcggtggag
ctgcgcaccggcgaggaggacctggtcttcatcaccgacgacgcccagctgctgcgctac
ccggcctcgcaggtgcgcccgcagggccgcccggccggcggcatggcgggcgtgaagctc
gccgacggcgccaaggtcatctccttcaccgctgtcgacccggcggccgacgcggtggtc
ttcaccgtggcccgcgccgaggacaccctggacggggcaggcgagggcaccgcgaagctc
acgccgttcgagcagtacccgcgcaagggccgggccaccggcggtgtgcgctgccagcgc
ttcctgcgcggcgagacgggcctgctgctggcctgggcgggcgccgccccggcccgtgcg
gcgaccgcggccggctcccccgccgacctcccgccgaaggacccgcgccgggacggctcc
ggtgtcccgctggccaagccggtggcggtggtcgcgggaccggtgtag
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