Actinacidiphila bryophytorum: NYE86_26650
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Entry
NYE86_26650 CDS
T08584
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
abry
Actinacidiphila bryophytorum
Pathway
abry02020
Two-component system
abry02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
abry00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NYE86_26650 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NYE86_26650 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abry03021
]
NYE86_26650 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
abry02035
]
NYE86_26650 (whiG)
Transcription machinery [BR:
abry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NYE86_26650 (whiG)
Bacterial motility proteins [BR:
abry02035
]
Flagellar system
Flagellar assembly proteins
Stator
NYE86_26650 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
UPF0122
HTH_31
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
UWE11925
LinkDB
All DBs
Position
complement(6225633..6226469)
Genome browser
AA seq
278 aa
AA seq
DB search
MPQYTPGSERATAATTAPAAPRPAAPTSLDALWRTYKSTGDARLREQLILHYSPLVKYVA
GRVSVGLPANVEQADFVSSGVFGLIDAIEKFDPDRAIKFETYAITRIRGAMIDELRALDW
IPRSVRQKARAVERAYATLEAKLRRTPSEPEVAAEMGVGLEELHGVFSALSLANVVALEE
LLHVGADSGDRLSLVDTLEDTGADNPVEVAEDRELRRLLARAVNTLPEREKTVVTLYYYE
GLTLAEIGQVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagtacacccccgggtccgaacgggcgacggccgcgaccaccgcccccgctgcc
cctcggcccgccgcccccacatcgctcgacgcgctgtggcggacctacaagtccacgggg
gacgcgcggctgcgcgagcagttgatcctgcactactcgccgctggtgaaatacgtcgcc
ggccgggtcagcgtggggctgccggccaacgtcgagcaggcggacttcgtctcctcgggg
gtgttcgggctgatcgacgcgatcgagaagttcgacccggaccgggccatcaagttcgag
acctacgcgatcaccaggatccgcggcgccatgatcgacgagctgcgcgccctggactgg
atcccgcgctcggtgcggcagaaggccagggcggtcgagcgggcgtacgcgaccctggag
gccaagctccggcgcacccccagcgaacccgaggtcgccgccgagatgggcgtcggcctc
gaggagctgcacggcgtcttcagcgccctgtcgctggccaacgtggtggccctggaggag
ctgctgcacgtcggcgcggacagcggcgaccggctcagcctggtggacaccctggaggac
accggcgccgacaacccggtcgaggtcgccgaggaccgcgagctgcgccggctgctcgcc
cgcgccgtcaacaccctgcccgagcgggagaagaccgtcgtcaccctctactactacgag
ggcctgacgctcgccgagatcggccaggtcctcggggtcaccgagagccgggtcagccag
atccacaccaagtcggtgcttcaactgcgggcaaagctcgccgacgtcggccgctga
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