Actinacidiphila bryophytorum: NYE86_29195
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Entry
NYE86_29195 CDS
T08584
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
abry
Actinacidiphila bryophytorum
Pathway
abry03420
Nucleotide excision repair
abry03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NYE86_29195
03430 Mismatch repair
NYE86_29195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abry03400
]
NYE86_29195
Enzymes [BR:
abry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NYE86_29195
DNA repair and recombination proteins [BR:
abry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYE86_29195
MMR (mismatch excision repair)
Other MMR factors
NYE86_29195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
UWE12359
LinkDB
All DBs
Position
complement(6805151..6808522)
Genome browser
AA seq
1123 aa
AA seq
DB search
MATRIESPEQLKELLGIPFTPEQTACITAPLAPGVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELSERVRKALAQAGITERDPYEPGARPRDPYEPGDGPQEQGEG
AAGDPNISTYHAFAGQLLKDHGMRIGLEPTARLLADATRYQLAAKVLRSAPGPYPALTKG
LPTLVGDLLALAGELAEHLVPAEELRAYDTGLAGQLSALDPAKRGNAWVREVRQAVAARR
DLAELAAAYRDGKRRRDLLDFGDQIELSARLAQTRPEVGALLREQYRVVLLDEYQDTSVA
QRLLLAGLFGGRSGHAVTAVGDPCQAIYGWRGASVANLDDFPRHFAHPDGRPAARYSLSE
NRRSGGRLLDLANTLAAELRARHEGVEALRPAPGAELEGQVRCALLPTQQEETAWLADSI
AHLVRTGTPPGGIAVLCRTAAHFPEIHAALVARDIPVEVVGLSGLLHLPEVADLVAVCEV
LHDPTANAALVRLLTGPRWRIGPRDLALLGRRARLLVRYGAGAAEGQDPLAAAVEGVDPA
EVVSLADALETFLDADPDDGLPFSAEARVRFARLAAEIRDLRRALADPLMDVLHRVLATT
GLDVELSASPHALAARRRETLSSFLDVAAGFAALDGEATLLAFLGFLHTAAQYEKGLDSS
LPGGEDTVKVLTAHKSKGLEWDVVAVPGLVAKGFPSERGRELWPLNAKVLPHGLRGDAAT
LPDVPEWTKAGIDGFRGAMKEHQRIEELRLGYVTFTRPRSLLLGSGHWWGPTQKAPFGPS
VFLDALREHCEAGYGEIEVWADPPEEGAANPALEAVQEHAWPLPLDPVGLRRRRWAARTV
LAYSEEEAGEARGPGIPGARGESGVPEEPGTDAGDPGEQDGLDPAEARLVASWDRDLDAL
AGELRRARATVRDVPLPATLTASQLMQLAADPDGLARELARPMPRPPAPAARRGTRFHAW
VESRFDARPLFGPEDLPGIEGADDIADEADLAALKDAFLRSPYADRTPYRVEVPVHLTLG
GRVVRGRIDAVYRGRADETSDTYGGTAAAADTYEIVDWKTGRSPAAAADPLQLAIYRVAW
AERQGVPLHQVSAAFLFVRTGEVVRPAHLPGRAELEELLAPGD
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacccgtatcgaatcgcccgagcagctcaaggagctgctgggcatccccttcacc
ccggagcagacggcgtgcatcaccgcgccgctcgccccgggcgtgatcgtggccggtgcg
gggtcgggcaagacgacggtgatggccgcccgggtggtgtggctggtcggcaccgggcag
gtcgcgcccgagcaggtgctcggcctgaccttcaccaacaaggcggcgggcgagctgtcg
gagcgggtgcgcaaggcgctggcgcaggccggcatcaccgagcgcgacccgtacgagccg
ggcgcccggccgcgcgacccgtacgagccgggcgacgggccgcaggagcagggcgagggc
gcggccggcgacccgaacatctcgacttaccacgccttcgccgggcagctgctcaaggac
cacggcatgcggatcggccttgagccgaccgcccggctgctcgccgacgccacccgctac
cagctcgcggcgaaggtgctgcggtccgcgcccgggccgtatccggcgctcaccaagggc
ctgccgaccctcgtcggcgacctgctggcgctggcgggcgaactggccgagcacctggtg
cccgcagaggagctgcgcgcgtacgacaccgggctcgccgggcagctgtccgcgctcgac
ccggccaagcgcggcaacgcatgggtgcgggaggtgcgccaggccgtcgccgcccgccgc
gacctggccgagctggccgccgcctaccgcgacggcaagcggcgccgcgacctgctggac
ttcggcgaccagatcgagctgtcggcgcggctggcgcagaccaggcccgaggtcggtgca
ctgctgcgcgagcagtaccgggtggtgctgctcgacgagtaccaggacacctcggtcgcc
cagcggctgctgctggccgggctgttcgggggccgcagcgggcacgcggtgaccgcggtc
ggcgacccctgccaggccatctacggctggcgcggcgcgtcggtggcgaacctcgacgac
ttcccgcggcatttcgcgcaccccgacggccgccccgccgcccgctactcgctcagcgag
aaccgccgctccggcggccggctgctcgacctggccaacaccctggccgcggagctgcgc
gcccgccacgagggcgtcgaggcgctgcgccccgcccccggggccgagctggaggggcag
gtgcgctgcgccctgctgccgacccagcaggaggagacggcgtggctcgccgactccatc
gcgcacctggtgcgcaccggcacgccccccggcggcatcgcggtgctgtgcaggacggcc
gcgcacttccccgagatccatgccgcgctggtggcccgcgacatccccgtcgaggtggtg
ggcctgtccgggctgctgcacctgccggaggtcgccgacctggtcgcggtctgcgaggtg
ctgcacgacccgaccgccaacgcggccctggtccggctgctgaccggcccgcgctggcgg
atcggcccgcgcgacctggccctgctgggccgccgcgcccggctgctcgtacggtacggg
gccggcgccgccgaagggcaggacccgctggcagcggcggtggagggcgtcgacccggcc
gaggtggtctcgctcgccgacgccctggagaccttcctcgatgccgaccccgatgacggg
ctgcccttctccgccgaggcccgggtgcgcttcgcccggctggcggccgagatacgggac
ctgcgcagggcgctcgccgacccgctgatggacgtgctgcaccgggtgctggccaccaca
gggctggacgtcgagctgtccgcgtccccgcacgcgctggccgcccgcaggcgcgagacg
ctgtcgtcgttcctggacgtcgcggccggtttcgcggccctggacggcgaggcgacgctg
ctggccttcctcggcttcctgcacaccgcggcgcagtacgagaagggcctcgacagctcg
ctgccgggcggcgaggacaccgtcaaggtgctgaccgcgcacaagtccaagggcctggag
tgggacgtggtggccgttcccgggctggtcgccaagggtttccccagcgagcgcgggcgc
gaactgtggccgctcaacgccaaggtgctgccgcacgggctgcgcggcgacgcggcgacg
ctgcccgacgtgccggagtggacgaaggccgggatcgacggcttccgcggcgccatgaag
gagcatcagcgcatcgaggaactgcggctcggctatgtgaccttcacccggccgcgctcg
ctgctgcttggctcggggcactggtggggtccgacgcagaaggcgcccttcggcccctcg
gtcttcctcgacgccctgcgcgagcactgcgaggcgggctacggcgagatcgaggtgtgg
gccgacccgccggaggagggcgcggccaaccccgcgctcgaagcggtccaggagcacgcc
tggccgctgccgctcgacccggtgggcctgcgcaggcggcgctgggcggcgcgcacggtg
ctggcgtacagcgaggaggaggcgggggaggcgcgcggccccgggattcccggtgcgcgc
ggcgagtcaggggtgccggaggagcccggcacggacgccggcgaccccggggagcaggac
ggcctcgacccggccgaagccaggctcgtcgcgtcctgggaccgcgacctggacgccctc
gcgggcgagctgcgcagggcgcgggccaccgtgagggacgtgccgctgcccgcgacgctc
accgcgagccagctcatgcagctggccgcggaccccgacgggctcgcccgcgaactggcc
cgccccatgccccgcccgccggcccccgcggcccgccgcggcacccgcttccacgcctgg
gtcgagtcccgcttcgacgcccgcccgctgttcggcccggaggacctgcccggcatcgag
ggcgccgacgacatcgcggacgaggccgacctcgcggcgctcaaggacgccttcctgcgc
agcccgtacgccgaccgcaccccttaccgcgtcgaggtcccggtgcacctcaccctgggc
ggccgggtcgtcaggggccggatcgacgcggtctaccgcggccgcgcggatgagacgtcc
gacacgtacggcgggacggccgcggcggcggacacgtacgagatcgtggactggaagacc
ggccgcagccccgccgctgccgccgacccgctgcagctggcgatctaccgggtggcctgg
gcggagcggcagggcgtaccgctgcaccaggtgagcgccgccttcctgttcgtgcgcacc
ggcgaggtggtgcgcccggcgcacctgcccggccgcgcggagctggaggaactgctggcc
ccgggggactga
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