Actinacidiphila bryophytorum: NYE86_30975
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Entry
NYE86_30975 CDS
T08584
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
abry
Actinacidiphila bryophytorum
Pathway
abry03420
Nucleotide excision repair
abry03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NYE86_30975 (pcrA)
03430 Mismatch repair
NYE86_30975 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abry03400
]
NYE86_30975 (pcrA)
Enzymes [BR:
abry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NYE86_30975 (pcrA)
DNA repair and recombination proteins [BR:
abry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYE86_30975 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NYE86_30975 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DNA_pol3_gamma3
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
UWE12671
LinkDB
All DBs
Position
complement(7209048..7211486)
Genome browser
AA seq
812 aa
AA seq
DB search
MSSLFDDDFLPGLHVAPEPADPDAPPPPEDLGAGGGHGGGGRDAYYRNGAPRPATDPAQL
LEGLNEQQRAAVEHSGGPLLIVAGAGSGKTRVLTHRIAHLLAARHVHPGSILAITFTNKA
AGEMKERVEQLVGPRAKVMWVSTFHSACVRILRRESKVLGFTSSFSIYDAADSKRLMALV
CRDLDLDPKQYPPKSFSAKISNLKNELIDEETFAGQAENPFEKKLAEAYALYQARLREAN
ALDFDDIIMTTVNLLQAFPDVAEHYRRRFRHVLVDEYQDTNIAQYTLVRELVGEGDEAAE
LCVVGDADQSIYAFRGATIRNILQFEEDYPDARTILLEQNYRSTQTILSAANAVIERNAG
RRAKNLWTESGDGPVIVGYVADQEHDEAQFVADEIDRLTDAGDARPGDVAVFYRTNAQSR
VFEEVFIRVGLPYKVVGGVRFYERREVRDVLAYLRVLANPEDGVPLRRILNVPKRGIGDR
AEAMIDALALREKVSFAAALRRVDEAYGMAARSANAVRRFNTLMDELRTIVESGAGPAVV
LEAVLERTGYLAELQASTDPQDETRVENLQELAAVALEFEQERAEDEPGTLADFLERVAL
VADSDQIPDDDAEAGGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRALGQVKELEEER
RLAYVGITRARERLYLTRSMMRSAWGQPSYNPPSRFLEEIPESLIEWKRTGAAPSAAGSP
ASKAASSLSSTVGAGGGFGRRGGASGGFATRRSAGDRPVISLSVGDRVTHDQFGLGTVVA
VTGQPGDEKATIDFGDERPKMLLLRYAPVEKL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacgacttcctgcccggtctgcacgtggcgccggaacctgcc
gaccccgacgcgccgccgcccccggaggacctgggcgcgggcggcgggcacggcggcggc
gggcgcgacgcgtactaccgcaacggcgccccgcgcccggcaaccgaccccgcgcagctg
ctcgaaggcctcaacgagcagcagcgcgccgccgtcgagcactccggcgggccgctgctc
atcgtcgcgggcgccggctccggcaagacccgggtgctgacccaccgcatcgcccacctg
ctcgccgcccggcacgtccaccccggctcgatcctcgcgatcaccttcaccaacaaggcc
gcgggcgagatgaaggagcgggtcgagcagctcgtcgggccgcgcgcgaaggtgatgtgg
gtctccaccttccacagcgcgtgcgtgcgcatcctgcgccgcgagtccaaggtgctcggc
ttcacctcgtcgttctcgatctacgacgccgccgactccaagcgcctgatggccctggtc
tgccgggacctcgacctggaccccaagcagtacccgccgaagtccttcagcgccaagatc
tccaacctcaagaacgagctgatcgacgaggagaccttcgccgggcaggcggagaacccc
ttcgagaagaagctcgccgaggcctacgcgctctaccaggcccggctgcgcgaggccaac
gcgctggacttcgacgacatcatcatgaccaccgtcaacctgctgcaggccttccccgac
gtcgccgagcactaccggcggcgcttccggcacgtcctggtcgacgagtaccaggacacc
aacatcgcccagtacacgcttgtgcgcgagctggtgggggagggcgacgaggcggcggag
ctgtgcgtcgtcggcgacgccgaccagtccatctacgccttccgcggcgcgaccatccgc
aacatcctccagttcgaggaggactacccggacgcccgcaccatcctgcttgagcagaac
taccgctccacgcagaccatcctgtccgccgcgaacgccgtcatcgagcgcaacgcgggg
cggcgcgcgaagaacctgtggaccgagtccggcgacggcccggtcatcgtcggctacgtc
gccgaccaggagcacgacgaggcgcagttcgtcgccgacgagatagaccgcctcaccgac
gccggcgacgcccgccccggcgacgtcgccgtcttctaccgcaccaacgcccagtcccgg
gtcttcgaagaggtcttcatccgggtcggcctgccctacaaggtcgtcggcggcgtccgc
ttctacgagcggcgcgaggtccgcgacgtgctcgcgtacctgcgggtgctggccaacccc
gaggacggcgtaccgctgcggcgcatcctcaacgtgcccaagcgcggcatcggcgaccgg
gcggaggcgatgatcgacgccctcgcgctgcgcgagaaggtgtccttcgccgcggccctg
cgccgggtggacgaggcgtacggcatggccgcgcgctcggccaacgcggtgcggcgcttc
aacaccctgatggacgagctgcgcaccatcgtggagtccggtgcgggccccgccgtcgtc
cttgaggcggtgctcgaacgcacgggctacctcgccgagttgcaggcctccaccgacccg
caggacgagacccgggtggagaacctgcaggaactggccgcggtggccctggagttcgag
caggagcgcgccgaggacgagcccggcaccctggccgacttcctggagcgcgtcgccctg
gtcgccgactccgaccagatccccgacgacgacgcggaggccggcggcgtcatcaccctg
atgaccctgcacaccgccaagggcctggagttcccggtcgtcttcctgaccggcatggag
gacggcgtcttcccgcacatgcgcgcgctcggacaggtcaaggagctggaggaggagcgg
cggctggcctacgtcggcatcacgcgcgcccgcgaacgcctctacctgacccgctcgatg
atgcgcagcgcctggggccagccctcgtacaacccgccgtcgcgcttcctggaggagatc
cccgagtcgctcatcgagtggaagcgcaccggcgcggccccctcggcggccggcagcccg
gcctccaaggccgcatcgtcactgtccagcaccgtgggcgcgggcggcggcttcgggcgg
cggggcggtgcgtccggcggcttcgctacccggcggtcggccggcgaccggccggtcatc
tcgctgtcggtgggcgaccgggtcacgcacgaccagttcggcctgggcacggtcgtggcc
gtcaccgggcagccgggcgacgagaaggcgacgatcgacttcggcgacgagcggcccaag
atgctgctgctgcgctatgcgccggtggagaagctgtag
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