Actinacidiphila bryophytorum: NYE86_33765
Help
Entry
NYE86_33765 CDS
T08584
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
abry
Actinacidiphila bryophytorum
Brite
KEGG Orthology (KO) [BR:
abry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abry03032
]
NYE86_33765 (topA)
03400 DNA repair and recombination proteins [BR:
abry03400
]
NYE86_33765 (topA)
Enzymes [BR:
abry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NYE86_33765 (topA)
DNA replication proteins [BR:
abry03032
]
Prokaryotic type
DNA Topoisomerases
NYE86_33765 (topA)
DNA repair and recombination proteins [BR:
abry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NYE86_33765 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UWE13156
LinkDB
All DBs
Position
complement(7789989..7792796)
Genome browser
AA seq
935 aa
AA seq
DB search
MSPTRETAPAGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPAEYKGQ
PWARLGVNVDSDFQPIYVVNADKKAQVKKLKELLKDSDELFLATDEDREGEAIAWHLQEI
LKPKVPVHRMVFHEITKDAIQEAVRNPRELNQRLVDAQETRRILDRLYGYEVSPVLWKKV
MPRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGVFGTGRSGDSSDPSTLNARLVSV
DGRRVAQGRDFDASTGALKGGATVLHLDEAAARALAAALADTQFSVRSVESKPYRRSPYA
PFRTTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSETAISAARAQVTQL
YGADYLPDKPRVHAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWMRTVAS
QMKDAVGQSVTVRVGGTSADGRDAEFSASGKIITFHGFLKAYVEGADDPNAELDDRERRL
PQVAEGDALTAEQITADGHSTKPPARYTEASLVKELEEREIGRPSTYATILGTILDRGYV
FKKGTALVPTFLSFAVVNLLEKHFGWLVDYDFTASMEDDLDRIARGEAQSVPWLRRFYFG
AEDPGAAAAAPGTDGDHLGGLKELVEDLGAIDAREISSFPVGDGIVLRVGRYGPYVEKGE
RGEDDHRRADVPDDLPPDELDVGYAEELFARPSGDFELGNDPATGRPIVAKDGRYGPYVT
EVLPEDTPKTGKNAVKPRTASLFKSMSLDTVTLEDALRLMSLPRVVGKDAEGVEITAQNG
RYGPYLKKGTDSRSLETEDQLFTITLDEALAIYAQPKQRGRAAAKPPLKELGTDPVSERP
VVVKDGRFGPYVTDGETNATLRRDDDVETITPERGYELLAEKRAKGPAKKAPAKKKAAPA
KKAAAKKAAPAKKVAAKKAAAPKKTPAKKSAPSPE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgacccgcgagaccgcaccggccggccgccgactcgtcattgtcgagtcgccc
gccaaggcgaagacgatcaagggctatctcggccctggatacgtcgtcgaggccagcgtc
gggcacatccgcgacctccccaacggggccgccgaagtgccggcggagtacaagggccag
ccgtgggcgcggctcggcgtgaatgtggacagcgacttccagccgatctacgtcgtgaac
gccgataagaaggcacaggtcaagaagctcaaggagcttctgaaggactccgacgaacta
ttcctggccactgacgaggaccgcgagggcgaggccatcgcctggcatttgcaggaaatc
ctcaagcccaaggtcccggtgcaccggatggtcttccacgagatcaccaaggacgccatc
caggaagccgtccgcaatccgcgggagctgaaccagcggctcgtcgacgcccaggagacc
cgccgcatcctcgaccggctctacggctacgaggtctcgccggtcctgtggaagaaggtc
atgccgcggctgtcggccggccgcgtccagtcggtggccacccggctcgtcgtcgagcgg
gagcgcgagcgcatcgccttccgctccgccgagtactgggacctgaccggcgtcttcggc
accggccgcagcggcgacagctccgacccgtccacgctcaacgcccggctggtctccgtc
gacggccgccgtgtcgcccagggccgcgacttcgacgcctccaccggcgcgctcaagggc
ggcgcgaccgtcctgcacctggacgaggccgcagcccgcgcccttgccgcggcactcgcc
gacacgcagttctcggtgcgcagcgtcgagtccaagccctaccgccgctcgccgtacgcg
cccttccgcaccaccacgctccagcaggaggcctcgcgcaagctcggcttcggcgcgaag
gccaccatgcaggtcgcccagaagctgtacgagaacggcttcatcacctacatgcgtacg
gactccacgacgctctccgagaccgcgatcagcgccgcccgcgcccaggtcacgcagctc
tacggcgccgactacctgccggacaagccgcgtgtgcacgccggcaaggtcaagaacgcg
caggaggcgcacgaggcgatccgcccgtcgggcgaccgcttccgcacccccgccgagacc
ggcctgaccggcgaccagttccggctgtacgagctgatctggatgcggaccgtcgcctcc
cagatgaaggacgcggtcggccagtccgtcaccgtcagggtcggcggcacctccgccgac
ggtagggacgccgagttcagcgcgtccggcaagatcatcaccttccacggcttcctcaag
gcctacgtcgaaggcgccgacgaccccaacgctgaactggacgaccgcgagcgccggctg
ccgcaggtcgcagagggcgacgccctgaccgccgagcagatcaccgcagacggccactcc
accaagccgcccgcccgctacaccgaggcgtcgctggtcaaggagctggaagagcgcgag
atcggccgcccgtcgacgtacgccacgatcctgggcaccatcctcgaccgcggctacgtc
ttcaagaagggcaccgcgctcgtcccgaccttcctgtccttcgccgtcgtcaacctgttg
gagaagcacttcggctggctcgtcgactacgacttcaccgcctccatggaggacgacctc
gaccgcatcgcccgcggcgaggcccagtccgtgccgtggctgcgccgcttctacttcggc
gccgaggacccgggggctgccgccgccgcacccggcaccgacggcgaccacctcggcggc
ctcaaggaactggtcgaggacctcggcgccatcgacgcccgggagatctcctccttcccc
gtcggcgacggcatcgtgctgcgggtcggccgctacggcccctacgtcgagaagggcgag
cgcggcgaggacgaccaccgccgcgccgacgtccccgacgacctgccgcccgacgagctg
gacgtcggctacgcggaagagctgttcgcccgccccagcggcgacttcgaactgggcaac
gaccccgccaccggccgccccatcgtcgccaaggacggccgctacggcccctacgtcacc
gaggtcctgcccgaggacacccccaagaccggcaagaacgcggtcaagccgcgcaccgcc
tcgctcttcaagtccatgtccctggacacggtcaccctggaggacgcgctgcggctcatg
tcgctgccccgcgtcgtcggcaaggacgccgaaggcgtcgagatcaccgcgcagaacggc
cgctacggcccgtacctgaagaagggcacggactcgcgctccctggagaccgaggaccag
ctcttcaccatcaccctcgacgaagcgctggccatctacgcgcagcccaagcagcgcggg
cgcgccgccgccaagccgccgctgaaggagctcggcaccgacccggtcagcgagcgcccc
gtcgtcgtcaaggacggccgcttcggcccctacgtcaccgacggggagaccaacgccacg
ctccggcgcgacgacgacgtcgagaccatcaccccggagcggggctacgaactcctcgcg
gagaagcgggccaaggggcctgccaagaaggcccccgcgaagaagaaggctgcgccggcg
aagaaggctgcggccaagaaggccgctcctgcgaagaaggttgcggccaagaaggccgcg
gcccccaagaagacgccagcgaagaagtcggccccttcccccgagtag
DBGET
integrated database retrieval system
