Actinacidiphila bryophytorum: NYE86_35355
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Entry
NYE86_35355 CDS
T08584
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
abry
Actinacidiphila bryophytorum
Brite
KEGG Orthology (KO) [BR:
abry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abry03021
]
NYE86_35355
Transcription machinery [BR:
abry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NYE86_35355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
Sigma70_ECF
HTH_3
DUF7343
MarR
HTH_24
KORA
Motif
Other DBs
NCBI-ProteinID:
UWE13438
LinkDB
All DBs
Position
8124716..8125555
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AA seq
279 aa
AA seq
DB search
MSVQVGSPKVLRPNDDAPHDALHGEAIDTRTLSRSLFLRLAEVPADSPERTYVRDTLIEL
NLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTIVGEVKRF
FRDTSWSVRVPRRLQELRLALTKASDELSQRLDRSPTVAELALCLGVSEEDVVDGLAVGN
AYTASSLDSPPPEDDGGEGTLADRLGYEDAALEGVEYRESLKPLLAQLPPRERQIIMLRF
FANMTQSQIGEEVGISQMHVSRLLTRTLSQLREGLTAEG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacaggtgggcagtcccaaggtgctccgtcccaatgacgacgcaccgcacgat
gctcttcacggcgaggccatcgacacccgcacgctgtcccgctcgctcttcctgcgactt
gcggaagtcccggcggacagcccggaacgcacctacgtacgcgacacgctgatcgagctg
aacctcccgctcgtgcggtacgcggcggcccgcttccgcagccgcaacgagccgatggag
gacatcgtccaggtcggcaccatcggcctgatcaaagccatcgaccgcttcgactgcgag
cgcggggtggagttcccgacgttcgcgatgccgaccatcgtcggcgaggtgaagcggttc
ttccgcgacacctcctggtcggtccgggtgccgcggcggctgcaggaactgcggctggcc
ctcaccaaggccagcgacgagctgtcccagcggctcgaccgctcgccgaccgtggcggaa
ctggccctgtgccttggtgtgtccgaggaggacgtggtcgacggcctggcggtgggcaac
gcctacacggccagctcgctcgactccccgccgcccgaggacgacggcggcgaaggcacg
ctcgccgaccggctcggctacgaggacgccgcactcgagggcgtcgagtaccgcgagtcg
ctcaagccgctgctggcccaactgccgccgcgcgagcggcagatcatcatgctgcgcttc
ttcgcgaacatgacgcagtcgcagatcggcgaggaggtcggcatctcccagatgcacgtc
tcccggctgctgacccgcacactgtcgcagctgcgtgagggtctgacggcagagggatga
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