Azospirillum baldaniorum Sp245: AZOBR_10501
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Entry
AZOBR_10501 CDS
T02152
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
abs
Azospirillum baldaniorum Sp245
Brite
KEGG Orthology (KO) [BR:
abs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abs03016
]
AZOBR_10501
Enzymes [BR:
abs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AZOBR_10501
Transfer RNA biogenesis [BR:
abs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AZOBR_10501
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Corona_NS2A
FAT
Motif
Other DBs
NCBI-ProteinID:
CCC96714
UniProt:
A0A9P1JNE3
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All DBs
Position
469226..469762
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AA seq
178 aa
AA seq
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MIRLFVALDFPEDVRRRLAGLGGGVPGARWTDADNLHLTLRFIGEVPEDQAAEIDESLAQ
IAAPAFDLVLDGVGVYGSGRNARVLWAGVERSDALSHLQSKVESALVRCGLPAEERKFSP
HVTLARLKDAPKDRIGRFVEERGMFRAGPIRVEHFTLYRSHLGKGAAVYEALSEYGLG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtctcttcgtcgccctcgattttccggaggatgtgcgccggcgtctggcgggg
ctgggcggcggcgtgcccggcgcccgctggaccgacgcggacaacctgcacctgacgctc
cgcttcatcggggaggtgccggaggatcaggcggcggagatcgacgagtcgctggcgcag
atcgcggcgccggccttcgatctggttctggacggcgtgggcgtctacggcagtggccgc
aacgcccgcgtcctctgggccggggtggagcgcagcgacgccttgtcgcacctccagtcc
aaggtcgagtcggctctggtccgctgcggcttgccggcggaggagcgcaaattctcgccc
cacgtcacgctcgcccggctgaaggacgcgccgaaggaccggatcgggcgcttcgtcgag
gagcgcggtatgttccgcgccggtccgatccgggtggagcacttcacgctctaccgcagc
cacctgggcaagggggccgcggtgtacgaggcgctgtcggaatacgggttgggatga
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