Azospirillum baldaniorum Sp245: AZOBR_180127
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Entry
AZOBR_180127 CDS
T02152
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
abs
Azospirillum baldaniorum Sp245
Pathway
abs03420
Nucleotide excision repair
abs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AZOBR_180127 (uvrD)
03430 Mismatch repair
AZOBR_180127 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abs03400
]
AZOBR_180127 (uvrD)
Enzymes [BR:
abs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AZOBR_180127 (uvrD)
DNA repair and recombination proteins [BR:
abs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AZOBR_180127 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AZOBR_180127 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DEAD
Metallophos_C
AAA_12
AAA_22
sCache_2
Motif
Other DBs
NCBI-ProteinID:
CCC99057
UniProt:
A0A9P1JSS1
LinkDB
All DBs
Position
complement(2620206..2622545)
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AA seq
779 aa
AA seq
DB search
MSDPYAYDDPLGHDPLSHAGAPAPAPAQRFAYLDGLNPVQREAVEALDGPVLVLAGAGTG
KTRVLTTRLAHLLMTRRAAAFQILAVTFTNKAAREMRERVAHLVGIEPEGWWLGTFHALA
ARILRRHAELVGLKSNFTILDTDDQIRLIKQLLEAANVDSKKWPARQVLGVIERWKDRGL
TPDRLNEGDGGDVAGGRVVALYRAYQERLRTLNACDFGDLLLHNITLFQKHPDVLAEYHR
KFKYILVDEYQDTNVAQYLWLRILSQAHKNICCVGDEDQSIYAWRGAEIGNILRFEADFP
GATVIKLEQNYRSTGHILSAASGLIANNKGRLGKTLWTQADGGEPVRVRGVWDGEEEARW
VGDEIEALQRQGVSLAQIAVLVRAGFQTREFEERFITLGLPYRVIGGPRFYERQEIRDAM
AYLRVVNSPDDDLAFERIVNVPKRGVGPAALQCLYQAARSRGMPLTEAGWALTETDELKP
KVRGVMRNLLQDFFRWRTLSATMPHTELARMILDESGYTRMWQEDKTPEAPGRLENLKEL
ITAMAEFENLSGFLEHVALVMENAEAAGVDQVTVMTLHGAKGLEFDMVFLPGWEEGVFPN
QRALDETGIAGLEEERRLAYVGLTRARKRAYISHAANRRLYGNWVSAIPSRFVEEIPSGD
VEAEAASGLYPGGNAGGGFGGGGSFRDSSSYAAFRAGQQAAGRQQPPSPRTITLDSGSYQ
VAPRARPNAPFPKGARVFHQKFGYGTVTAVDQDKLEIDFDQAGSKKVMDSFVVPAEKAG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatccctacgcctacgacgatccgctgggccatgatcccctcagccacgcgggc
gccccggcccccgcgccggcgcagcgtttcgcctatctggacgggctgaaccccgtgcag
cgtgaggcggtcgaggctctggacggcccggttctggtgctggccggcgccggcaccggc
aagacgcgcgttctgaccacccggctggcccatctgctgatgacgcgccgcgccgccgcc
ttccagatcctggcggtgaccttcaccaacaaggccgcccgcgagatgcgggagcgcgtc
gcccatctggtggggatcgagccggagggctggtggctgggcaccttccacgcgctggct
gcgcgcatcctgcgccgccacgccgagctggtggggctgaagtccaacttcaccatcctc
gacaccgacgaccagatccgcctgatcaagcagcttctggaggcggcgaacgtcgattcc
aagaagtggccggcgcggcaggtgctgggcgtgatcgagcgctggaaggaccgcggcctg
accccggaccggctgaacgagggcgatggcggcgacgtggccggcgggcgcgtggtggcg
ctctaccgcgcctaccaggagcggctgcgcacgctgaacgcctgcgacttcggcgatctc
ctgctgcacaacatcacactcttccagaagcaccccgacgtgctggcggaataccaccgc
aagttcaagtacatcctggtggacgagtatcaggacaccaacgtcgcccagtatctgtgg
ctgcgcatcctctcgcaggcccacaagaacatctgctgcgtcggcgacgaggaccagtcg
atctacgcttggcgcggcgccgagatcggcaacatcctgcgcttcgaggccgacttcccg
ggcgccaccgtcatcaagctggagcagaactaccgctccaccgggcacatcctgtccgcc
gcctccggcctgatcgccaacaacaaggggcggctcggcaagacgctgtggacccaggcc
gacggcggcgaaccggtgcgcgtgcgcggcgtctgggacggcgaggaggaggcccgctgg
gtcggcgacgagatcgaggcgctgcagcgccagggcgtctcgctcgcccagatcgccgtc
ctggtccgcgccggcttccagacccgcgagttcgaagagcgcttcatcacgctgggcctg
ccctaccgggtgatcggcggcccgcgcttctacgagcgtcaggagatccgcgacgcgatg
gcctatctgcgcgtcgtcaactcgcccgacgacgatctggctttcgagcgcatcgtcaac
gtgcccaagcgcggcgtcggcccggcggccctgcaatgcctctatcaggcggcgcgctcg
cgcgggatgccgttgaccgaggccggctgggcgctgaccgagacggacgagctgaagccc
aaggtgcgcggcgtgatgcgcaacctgcttcaggacttcttccgctggcgcaccctgtcg
gcgaccatgccgcacaccgaactggcccggatgatcctggacgagtccggctacacccgc
atgtggcaggaggacaagacgcccgaggctccgggccggctggagaacctgaaggaactc
atcaccgccatggcggagttcgagaacctgtcgggcttcctggagcatgtcgccctggtc
atggagaacgccgaggccgcgggcgtcgatcaggtcacggtgatgaccctgcacggcgcc
aaggggctggagttcgacatggtcttcctgcccggctgggaggagggcgtgttccccaac
cagcgcgcgctggacgagaccggcatcgccgggctggaggaggagcgccgcctcgcctat
gtcgggctgacccgggcgcgcaagcgggcctacatcagccacgctgccaaccggcggctt
tacggcaactgggtcagcgccatcccctcccgcttcgtcgaggagatccccagcggcgac
gtcgaggcggaggcggcgagcggcctttatccgggcggcaatgccgggggcggtttcggt
gggggcgggagcttccgcgattcgtcgagctacgccgccttccgcgccggccagcaggcg
gcgggccggcagcagcccccgtcgccgcgcaccatcacgctggacagcgggtcctatcag
gtcgccccgcgcgcccgcccgaacgcgcccttcccgaagggggcgcgggtgttccaccag
aaattcggctacggcaccgtcacggcggtcgaccaggacaagttggagatcgacttcgac
caggccggcagcaagaaggtgatggacagcttcgtggtgccggcggagaaggcgggctga
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