Azospirillum baldaniorum Sp245: AZOBR_70097
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Entry
AZOBR_70097 CDS
T02152
Symbol
recD
Name
(GenBank) putative exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
abs
Azospirillum baldaniorum Sp245
Pathway
abs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AZOBR_70097 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abs03400
]
AZOBR_70097 (recD)
Enzymes [BR:
abs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AZOBR_70097 (recD)
DNA repair and recombination proteins [BR:
abs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AZOBR_70097 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
NTPase_1
PIF1
nSTAND3
HHH_2
AAA_16
NPHP3_N
RsgA_GTPase
AAA_22
MeaB
TraI_hel_assoc_N
AAA
AAA_28
T2SSE
ABC_tran
AAA_29
MobB
NACHT
cobW
TsaE
AAA_24
SLFN-g3_helicase
UvrD-helicase
ATP_bind_1
AAA_5
TrwB_AAD_bind
SRP54
ATPase_2
NB-ARC
HHH
AAA_17
KAP_NTPase
AAA_14
DnaB_C
KTI12
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
CCC97461
UniProt:
A0A9P1JPW1
LinkDB
All DBs
Position
1154153..1156363
Genome browser
AA seq
736 aa
AA seq
DB search
MLGGMSISGHAPPAAGTPAREPLSGLVERVTFHSPETGFCVLRLKVRGQRDLVTLVGHAA
TIGAGEFVQASGVWVNDRNHGLQFKADFLRATPPTTVEGIEKYLGSGLIRGIGPVYAKKM
VKAFGEAVFDVIEQEPDRLRQVTGIGPKRAQRIIAGWADQKVIREIMIFLHSHGVGTSRA
VRIFKTYGPDAIRLITENPYRLARDIRGIGFKTADAVAARLGIEKTAMIRARAGIGYALA
EATDQGHCGVPVAELIPLAVKLLEIDASILETAAELERQDGAVVADSLGGEPCLFLASLY
RAEQAIAERLRRLAGGPVPWPEIDAEKAIPWVEAKAGITLAEGQREALRQAATSKLLVIT
GGPGVGKTTLVNSILTMLKAKGVSIALAAPTGRAAKRLSESTGLEARTIHRLLETDPQAG
GFKRDETNPLDCDLLVVDETSMVDVPLMNALLRAVPGRAALLLVGDVDQLPSVGPGQVLG
DVIGSGAVPVVRLTEIFRQAATSRIIVNAHRINAGQMPEIPKTGEDSDFYFVEAATPEAG
VAKLIEMVRDRIPRRFGADPVRDVQILCPMNRGGLGARSLNIELQRVLNPPGESRVERFG
WTFGPGDKVMQVENNYDKEVYNGDLGIVSAVDAEEGVLTATFDGRPVTYDFGELDEVVLA
YATTIHKSQGSEYPVVVIPVVTQHYTMLHRNLIYTGVTRGKRLVVMLGQRRALAMAVRGT
PGRRRWTKLGEWLAPL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtggcatgagcatatccggccatgcacccccggcggcgggcacgcccgcgcgg
gagccgctgtcggggctggtggagcgggtgaccttccacagcccggagacgggattctgc
gtgctgcggctgaaggtgcgcgggcagcgcgacctcgtcacgctggtcggccacgccgcc
accatcggcgcgggggagttcgtgcaggccagcggcgtctgggtgaacgaccgcaaccac
ggactccagttcaaggccgacttcctgcgcgccaccccgccgaccacggtggagggcatc
gagaagtatctcggctccggcctgatccgcggcatcgggccggtctacgccaagaagatg
gtcaaggccttcggcgaggcggtgttcgacgtgatcgagcaggagccggaccggctgcgg
caggtcaccggcatcgggccgaagcgggcgcagcgcatcatcgccggctgggccgaccaa
aaggtgatccgcgagatcatgatcttcctgcacagccacggggtcggcacctcgcgggcg
gtgcgcatcttcaagacctacgggccggacgccatccggctgatcaccgagaacccctac
cggctggcccgcgacatccgcggcatcggcttcaagacggcggacgcggtggccgcaagg
ctgggcatcgagaagaccgcgatgatccgggcgcgggccggcatcggctatgccctggcc
gaggcgaccgaccagggccattgcggcgtgccggtggccgagctgatcccgctggccgtg
aagctgctggagattgacgcctccatcctggagaccgcggcggaactggagcggcaggac
ggcgcggtggtcgccgacagcctgggcggggagccctgcctgttcctggccagcctctac
cgggcggagcaggccattgccgagcggctgcgtcggctggctggcggtcccgtgccctgg
ccggagatcgacgcggagaaggctattccctgggtcgaggcgaaagccgggatcacgctg
gccgaaggtcagcgggaggcgctgcgccaagcggcgacgtcgaagctgctggtcatcacc
ggcggcccgggggtcggcaagacgacgctggtgaacagcatcctgaccatgctgaaggcc
aagggcgtgtcgatcgcgctggccgcccccaccggccgtgccgccaagcggctgagcgag
agcaccggcctggaggcgcggaccatccaccgcctgctggagaccgatccgcaggccggc
ggcttcaagcgcgacgagaccaacccgctggactgcgacctgctggtggtggacgagacc
agcatggtcgacgtgccgctgatgaacgcgctgctgcgcgccgtcccggggcgggcggcg
ctgctgctggtcggcgacgtggaccagctgccctcggtcgggccggggcaggtgctgggc
gacgtgatcggctccggcgcggtgccggtggtccggctgaccgagatcttccggcaggcg
gcgaccagccgcatcatcgtcaacgcccaccgcatcaacgccggccagatgccggagata
ccgaagacaggggaggacagcgacttctacttcgtcgaggcggcgactccggaggccggt
gtggcgaagctgatcgagatggtgcgcgaccgcattccccgccgattcggcgccgacccg
gtgcgcgacgtgcagatcctctgtccgatgaaccgcgggggcctgggcgcgcgctcgctg
aacatcgaattgcagagggtgctgaacccgccgggcgagtcccgagtcgagcgattcggc
tggaccttcggtcccggcgacaaggtcatgcaggtcgagaacaactatgacaaggaggtc
tacaacggcgacctcggcatcgtatccgccgtcgacgccgaagaaggtgtgctgaccgcc
accttcgacggccgcccggtgacctatgacttcggagaattggacgaggtcgtcctggcc
tatgcgacgacgattcacaagagccaaggctccgaatacccggtggtcgtcattccggtg
gtgacccagcattacacgatgctccaccgcaacctgatttataccggcgtgacgcgaggc
aagcgcctggtggtcatgctcggccagcgccgcgcgctcgccatggcggtgcgtggaacg
ccggggcggcggcgctggacgaaactgggggaatggctggcgcctctatga
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