Azospirillum baldaniorum Sp245: AZOBR_p1100060
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Entry
AZOBR_p1100060 CDS
T02152
Symbol
sbcC
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
abs
Azospirillum baldaniorum Sp245
Brite
KEGG Orthology (KO) [BR:
abs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abs03400
]
AZOBR_p1100060 (sbcC)
DNA repair and recombination proteins [BR:
abs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AZOBR_p1100060 (sbcC)
Archaeal homologous recombinant proteins
AZOBR_p1100060 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
ABC_ATPase
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CCD00488
UniProt:
A0A9P1JV95
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All DBs
Position
AZOBR_p1:916713..920480
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AA seq
1255 aa
AA seq
DB search
MRILAIRGGNLASLDGTFAVELASGPLGHAGLFAITGPTGAGKSTILDALCLALFDRMPR
LPDGRGVALGASGDTDAISTTDVRSVLRRGAGAGWAEVDFAGIDGAAYRARWELRRARQN
ARGQLQKQTMSLTALADGKRLGDGKTSVLDEISTRLGLSFEQFRRAVLLAQGDFANFLKA
PATERSALLELLTGTEIYSRISVAAHERSREEQRALEALEGQCAGIGVLTDDERAVLDAE
AGAAAEAVRREETAFEQARAAVAWHEQDARLAKAEADAAAASARAEAVWQEAGARREEAA
LLRRLQPLRARLSEADRCAAAASEAREALAHAHAAVTEAQDRLVQAEARHREVRSAYEAA
RGAIDAAEPELEQAATLDAEIAALAGQQAGALADAATAEADAKGIGESWSATRTALEQAR
ADSAERENWLAGQTALWPVADQWARWDSLLLRHRDSARAAREAEAEAGRAAAEVTAHEAE
LARLAAVRRDAAERRDEAERTLAALKAETVDSLDALRGRRTALAERRDGLAALAQLAERA
VRLATDSAETEAEGEQQCTAAAEEEARAGETKARLEQRRAALEEADLALRRLRLAPSETV
AFVRVQLVDGEAFPVCGAAEHPWGTGHTPLDRLTEDQEHHVAALRGEVTELAMDHGARTA
AAKAARERAGSLAGRLAALAVERAATEKRWAERAPAFGLPTGPDAETVARRLAGVDAELA
EVGRAEAAALDHKARLDAAVQACRERDAALADADRAIETRTRQRDSARHAESLFLARRDQ
AAEARQAVRTELAQPFAGLAGWAGDLDRDSEGFREHLGGRVADVLRQREGLARALRDVEA
LERQAGAKAAELEGAQQAEQAARRRCEGLAAALEDRRAARASLLDGRAVAAVKKELTEAC
RRTEALVEQATVARQDAAARLSGAEQTVATRGESARRCAAEAEAAADALIAVAERCGVTV
EAARAHLVRDEDWLAGEERALAALESAQREEALREAERTRTRQEHHAAGRPALDAGEAGE
AVAETGRRLQEARNRLGEAQARLRADTENRGRLAAVLDRVEAQRKAQGLWATMAQLIGSA
DGRKLRNFAQSLSLDLLLVQANRYLADLARRYRLERVGGADLEIQVVDGEMGDERRGVHS
LSGGEMFLVSLALALGLSAMAGGGGAGIGTLFIDEGFGTLDPDSLDLALSCLEALQATGR
QVGVISHVPALVERIGVQVRVIPQGGGRSAVTVTRGTLAAPSPDAAAQRELLLPL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgcggattctggcaattcgcggcggcaatctggccagcctggacgggaccttcgcggtg
gagctggccagcgggccgctgggccacgccggtctgttcgccatcaccggcccgaccggg
gcgggtaagagcaccatcctcgacgcgctgtgcctcgccttgttcgaccgcatgccccgg
ctgccggacgggcgcggcgtggcgctgggcgccagcggcgacaccgacgccatcagcacc
accgacgtgcgcagcgtcctgcgccgcggcgccggggccggctgggccgaggtggatttc
gccgggatcgacggcgccgcctaccgggcgcgctgggagctgcggcgggcgcggcagaac
gcgcgcggccagctgcagaagcagacgatgagcctgaccgcgcttgcggacggcaagcgg
ctgggcgacggcaagaccagcgtgctggacgagatttccacccggcttgggctgagcttc
gagcagttccgccgcgccgtcctgctggcccagggcgatttcgccaatttcctcaaggct
ccggcgacggagcgctccgccctgctggagctgctgaccggcaccgagatctattcccgc
atctccgtcgccgcgcacgagcgctcccgggaggagcagcgggcgctggaggcgctggag
gggcaatgcgcgggcatcggcgtgctgaccgacgacgagcgcgccgtcctggacgccgag
gccggagcggcggccgaggcggtccggcgggaggaaacggcgttcgagcaggcccgcgcc
gccgtcgcctggcatgagcaggacgcccggctggccaaggcggaagcggacgccgccgcg
gcgagcgcacgggccgaagcggtctggcaggaggccggggcgcggcgggaggaggccgct
ctgctccgccggctccagccgctgcgggcgcggttgagcgaggccgaccgctgcgccgcg
gcggcgtcggaggcccgggaggcgctggcccacgcccacgccgcggtgacggaggcgcag
gaccggctggtccaggccgaggcccgtcatcgcgaggtgcgcagcgcctacgaggccgcc
cgcggcgccatcgacgccgccgagcccgagttggaacaggcggccaccctggatgccgag
atcgccgcgctggccggccaacaggccggggcgctcgccgacgccgcgacggcagaggcg
gacgccaaggggattggagagagttggagcgccacccggacggcgctggagcaggcccgt
gccgactcggcggagcgggagaactggctggccggtcagacggcgctgtggccggtggcc
gaccaatgggcgcgctgggactcgctgctgctgcgccaccgcgactccgcgagggcggcg
cgggaggcggaggcggaggccggccgcgccgccgcggaggtcacggcccatgaggcggag
ctggcccgccttgccgccgtccggcgggacgccgccgaacggcgggacgaggccgagcgg
acgctggccgcgctgaaggccgaaacggtggactcgctggacgccttgcgcgggcgccgc
acggcgctggcggagcggcgcgacgggctggcggccctggcgcagttggcggagcgggcc
gtgcggctagcgacggacagcgcggagaccgaagcggaaggggagcagcagtgcaccgcc
gccgcggaggaggaggcccgcgccggcgagacgaaggcgcggctggagcagcgccgggcg
gcgttggaggaggcggatctggcgctgcgccgcctgcgccttgcccccagcgagaccgtg
gccttcgtgcgcgtccagctggtggacggcgaggccttcccggtctgcggcgccgcggag
cacccgtggggcaccggccacacgccgctcgaccggctgaccgaggaccaggaacaccac
gtcgccgccctgcgcggtgaggtgaccgagctggcgatggatcacggcgcccggaccgcc
gcggcgaaggcggcgcgggagcgtgcgggaagtctggccgggcggctggccgccctggcg
gtggaacgggcggcgacggagaagcgctgggccgaacgggcgccggccttcggcctgccc
accgggccggatgcggaaaccgtcgcccggcggctggccggcgtcgatgcggaactcgcc
gaggttgggcgggccgaggcggcggcgctggaccacaaggcacggctcgacgcggcggtg
caggcgtgccgggaacgggacgcggcgctggccgacgccgaccgggccatcgagacgcgg
acccgacagcgtgattcggcccgccacgccgagtccctgttcctggcgcggcgcgatcag
gcagcggaagcccggcaggcggtgcggacggaactggcccagcccttcgccgggttggcg
ggttgggccggtgacctcgaccgcgattccgaggggttccgcgagcatctcggcgggcgg
gtcgccgacgtcctgcgccagcgcgaggggttggcccgggcgctgcgcgacgtggaggcc
ctggaacggcaggccggcgccaaggcggcggagctggagggagcgcagcaggccgaacag
gcggcgcggcggcggtgcgaggggttggccgccgcgctggaggatcggcgcgcggcacgg
gcgtccctgttggacggacgggcggtggccgcggtgaagaaggagctgaccgaggcctgc
cggcgaaccgaggccctggtcgaacaggccaccgtcgcccggcaggacgcggcggcccgc
ctgtcgggggcggaacagaccgtcgccacgcgcggcgagtccgcccgccggtgcgccgcc
gaggcagaagcggcggccgacgccctgatcgccgtggcggagcgctgcggcgtcaccgtg
gaggcggcgcgcgcccatctggtccgggacgaggattggctggccggagaggagcgggcg
ctggccgccctcgagtcggcgcagcgcgaggaggcgcttcgggaggcggagcggacgcgg
acgcggcaggagcatcacgccgccggacggcccgcgctcgacgcgggggaggccggcgag
gccgtggccgagacgggccggcgccttcaggaggcccgcaaccggctgggcgaggcccag
gcccggctgcgcgccgacacggagaaccgcggccgcctcgccgccgtgctcgaccgggtg
gaggcgcagcgcaaggcacaggggctgtgggcgaccatggcgcagctcatcggctccgcc
gacgggcggaagctgcgcaacttcgcccagagcctcagcctcgatctgcttctggtccag
gcgaaccgctatctggctgatctcgcccgccgctaccggttggagcgggtgggcggggcc
gacctggagatccaggtggtggacggcgagatgggcgacgagcggcgcggcgtgcacagc
ctgtccggcggcgagatgttcctggtgtcactggccctggcgctcggcctgtcggccatg
gcgggaggaggaggagccgggatcggtaccctgttcatcgacgaggggttcggcacgctg
gaccccgacagcctggatctggccctgtcctgcctggaggcgctccaggccaccgggcgg
caggtcggcgtcatcagccacgtcccggcgctggtggagcggatcggcgtgcaggtgcgc
gtcatcccgcagggcggcgggcgcagcgccgtgacggttacccgcgggacgctggcggca
ccgtcgccggacgccgcggcgcagcgggaactgctgctgccgctgtag
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