Azospirillum baldaniorum Sp245: AZOBR_p1110040
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Entry
AZOBR_p1110040 CDS
T02152
Name
(GenBank) putative 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
abs
Azospirillum baldaniorum Sp245
Brite
KEGG Orthology (KO) [BR:
abs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abs03016
]
AZOBR_p1110040
Enzymes [BR:
abs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AZOBR_p1110040
Transfer RNA biogenesis [BR:
abs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AZOBR_p1110040
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CCD00576
UniProt:
A0A9P1NPL9
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All DBs
Position
AZOBR_p1:999589..1000215
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AA seq
208 aa
AA seq
DB search
MPIDLHDGDLPDGLDLKSFARGGAVAIDTETMGLNPHRDRLCLVQLSPGDGTVHLVQFRK
GQYEAPNLKRLLTDPEVIKLFHFARFDVAVMQAYLGIVCQPVYCTKVASKLVRTFTDKHG
LKDLVKDLLGVELSKQQQSSDWGAAELTPEQMKYAASDVLHLHDLKEKLDVMLAREGRTH
LAKACFDFLPVRGELDLGGWEQPDILAH
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgacctccatgacggcgacctgccggacggtctcgacctgaagtccttcgcc
cgcggcggcgccgtcgccatcgacaccgagaccatggggctgaacccccaccgcgaccgg
ctgtgcctggtccagctttcccccggcgacggcacggtgcatctggtccagttccgcaag
ggccagtacgaggcgcccaatctgaagcgcctgctcaccgaccccgaggtcatcaagctg
ttccacttcgcccgcttcgacgtggcggtgatgcaggcctatctgggcatcgtctgccag
ccggtctactgcaccaaggtcgcgtccaagctggtccgcaccttcaccgacaagcacggg
ctgaaggatctggtgaaggacctgctgggggtggaactgtccaagcagcagcagtcctcc
gactggggcgccgcggagctgacgccggagcagatgaaatacgccgcctccgacgtgctg
cacctgcacgacctgaaggagaagctggacgtcatgctggcgcgcgaagggcggacgcac
ctcgccaaggcctgtttcgacttcctgccggtccgcggggaactggacctcggcggctgg
gagcagcccgatattctggcgcattga
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