Azospirillum baldaniorum Sp245: AZOBR_p60005
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Entry
AZOBR_p60005 CDS
T02152
Symbol
rfbB
Name
(GenBank) dTDP-D-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
abs
Azospirillum baldaniorum Sp245
Pathway
abs00521
Streptomycin biosynthesis
abs00523
Polyketide sugar unit biosynthesis
abs00525
Acarbose and validamycin biosynthesis
abs00541
Biosynthesis of various nucleotide sugars
abs01055
Biosynthesis of vancomycin group antibiotics
abs01100
Metabolic pathways
abs01110
Biosynthesis of secondary metabolites
abs01250
Biosynthesis of nucleotide sugars
Module
abs_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
abs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AZOBR_p60005 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AZOBR_p60005 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
AZOBR_p60005 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AZOBR_p60005 (rfbB)
00525 Acarbose and validamycin biosynthesis
AZOBR_p60005 (rfbB)
Enzymes [BR:
abs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AZOBR_p60005 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Nudix_hydro
Motif
Other DBs
NCBI-ProteinID:
CCD03941
UniProt:
A0A9P1K1Q4
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Position
AZOBR_p6:7398..8480
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AA seq
360 aa
AA seq
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MRILVTGGAGFIGSAFIRWVLANTRASVVNLDKLTYAADLESLARFAEDPRYAFERVDIC
DEAELRRVFAAHRPAAVVHLAAETHVDRSIDGPMAFVQTNVVGTVTLLRVALDHWRGLEG
AEKDGFRFHHVSTDEVFGTLDDEGRFSETTPYAPNSPYSASKAASDHFVRAWHETYGLPT
VASNCSNNYGPWQFPEKLIPLMTLKALQGQRLPVYGSGLNVRDWLYVDDHASALWTILTK
GRLGESYNVGGDSERRNIDVVNAICDLVDEMAGPLPGGPRRTLVTHVTDRPGHDHRYAID
ATKLQTELGWRPSETFETGIRRTVAWYLENRAWWERLSANGYSGQRLGVAAAPAAEPAHG
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatactggtgacgggaggggccggcttcatcggctcggccttcatccgctgggtc
ctggcgaacacgcgggcgtcggtcgtcaacctcgacaagctcacctacgccgcggatctg
gaaagcctcgcccgcttcgccgaggacccgcgctatgccttcgagcgggtggacatctgc
gacgaggcggaactgcgccgggtcttcgccgcccaccgtccggcggcggtcgtgcatctg
gcggcggaaacccatgtggaccgctccatcgacgggccgatggccttcgtgcagaccaac
gtggtcggcaccgtgacgctgctgcgcgtggcgctcgatcactggcgcgggctggagggc
gcggagaaggacggcttccgtttccaccacgtttccaccgacgaggtgttcggcacgctg
gacgacgaagggcgtttctccgaaaccacgccctacgcgccgaattccccctattcggcc
agcaaggcggcgtccgaccatttcgtgcgcgcctggcacgagacctatgggctgccgacg
gtcgccagcaactgctcgaacaactacggcccctggcagtttcccgagaagctgatcccg
ctgatgacgctgaaggcgctgcaggggcagcggcttccggtctacggcagcggactgaac
gtgcgcgactggctttatgtggacgaccacgcttcggccctctggaccattctgaccaag
ggacggctgggcgagagctacaacgtcggcggcgacagcgaacggcgcaacatcgacgtg
gtcaacgccatctgcgacctcgtggacgagatggccggtccgcttcccggcggcccgcgg
cggaccctcgtcacccatgtcaccgaccggcccggccacgaccaccgctacgccatcgac
gccaccaagctgcagaccgagttgggctggcggccgtcggagaccttcgagaccggcatc
cgccgcaccgtcgcttggtatctcgagaaccgcgcctggtgggagcggctgtcggcgaac
ggctacagcggccagcgtctcggcgtggccgccgctcccgcggccgagcccgcccatggc
tga
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