Amedibacterium intestinale 9CBEGH2: A9CBEGH2_02680
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Entry
A9CBEGH2_02680 CDS
T06427
Symbol
spoVD
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
absi
Amedibacterium intestinale 9CBEGH2
Pathway
absi00550
Peptidoglycan biosynthesis
absi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
absi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A9CBEGH2_02680 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
absi01011
]
A9CBEGH2_02680 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
absi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
A9CBEGH2_02680 (spoVD)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
T3SS_needle_E
Ntox10
Motif
Other DBs
NCBI-ProteinID:
BBK61328
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Position
283033..284952
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AA seq
639 aa
AA seq
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MIRWKVKKRIQVIFLCCVMLFACILGKLGYEQLFHHGEIMEKAKESWERDFTVAGLRGSI
LDSKGEKLAYDVPSTSVMVVPAQIKDADTTAKQLADILEADEKKIKSTLTKKASTQKIQP
EGRLIDDKKAKKIEELGLDGVYLVQDSLRYYPNNNYLAQVLGFTGIDNQGLAGLELQYDN
ILRAQNGALKIPLDAKGHNVKMYKERYEAPGRGMDVQLTIDSTIQGIVEREVDNLVKKYH
PKSALALAMNPKTGEILAMVSKPDFDPNHYEDYDCDVYNRNLPIWMSYEPGSTFKSVIFA
SALDLNLFDMFKDTYDDKGYEMVNGARIKSWKAGGHGHQTFLQVLENSSNPGFVEISRRL
GLDKEVEYVKKFGFGEKTGIDLPGESSGIMFDKKKMSELEQATVAFGQGISVTPIQLVTA
FSAIINGGTLYQPYITKSVLDPITHDPLVEFKPTPKRQVIKEETSKQMRYALESVVANGG
GKPAYMEGYKIGGKTGTAQKAENGVYSTSDYILSFLSAAPMDDPQIVLYIAADSPQNDVL
YGGTVIAPIAKSCYEDILPYLGVEKTKNQIPKKLVWPETENIKVENFVGKKKKEVQQEGV
TFTFIGEGDYVIEQMPEEGTMFSSEGGEVWIYLGDDKVK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgattcgctggaaagtaaagaaaagaatacaagttatttttttatgctgcgtgatgtta
tttgcctgtattttaggaaaactaggatatgaacagctttttcatcatggagaaatcatg
gaaaaagcgaaagagtcgtgggaaagagattttactgtggcaggacttcgtggaagtatt
ttagattcaaaaggggagaagctggcttatgatgtaccaagtacttctgttatggtggtg
cctgcacaaattaaagatgcagatactactgcaaaacagctggcagatatactggaagca
gatgaaaagaaaataaagtcaaccttaactaagaaagcaagtacacaaaaaattcagcca
gaagggcggcttattgatgacaaaaaagcaaagaaaatagaagaactgggcttagatggg
gtctatttagtacaggattctttacgttattatccaaataataattatttggcacaggtt
ttaggatttacgggtattgataatcaagggttagcaggattggaactgcagtatgataat
attttgcgtgcacaaaatggagcattaaagattcctttagatgcgaaaggacataatgta
aagatgtataaggaacgatacgaagctccaggtagagggatggatgtacaattgaccatt
gattctacgatacagggaattgtggaaagagaagtagataatttagtaaaaaaatatcat
cccaaatcggctttagcactggcaatgaatccaaaaactggagagattctcgcaatggtt
tcaaaacctgattttgatcctaatcattatgaagattatgattgtgatgtatataatcga
aatcttcctatttggatgagttatgaaccaggatctacatttaaatcggttattttcgca
agtgctttagatttaaacctatttgatatgtttaaggatacgtatgatgacaaggggtat
gaaatggtaaatggagcacgcattaaatcgtggaaagccggaggacatggacatcagaca
tttttacaggtattggaaaattccagcaatccaggctttgtagaaatatcaagaagattg
ggattggacaaagaagtagagtatgttaaaaaatttggatttggagagaaaacaggcata
gatttgccaggagaatccagtggaattatgtttgataaaaaaaagatgagtgaattagaa
caggcaaccgttgcttttggacaaggaatcagtgtaactcctattcagttagtaacagca
tttagtgcgattatcaatggaggaactttgtatcagccctatattacgaaaagtgtttta
gatcctattacgcacgatccacttgtagaatttaagcctactccaaaaagacaggtaatt
aaagaagaaacaagtaaacaaatgcgttatgctttggaaagtgtcgttgcaaatggaggt
ggaaaaccggcttatatggaaggttataaaatagggggaaaaacaggaactgcacaaaaa
gcagaaaatggagtatattccacttctgattatatattgtcatttttatctgcagcacca
atggatgatccacagattgttttatatatcgcagcagatagtcctcaaaatgatgttttg
tatggaggaacggtcattgcccctattgcgaaatcttgttatgaagatattttaccttat
cttggcgttgaaaagacaaagaatcaaattcctaaaaaacttgtttggccggaaacagaa
aatataaaagtggaaaactttgtagggaaaaagaaaaaagaagtgcagcaggaaggagtt
acgtttacctttattggcgagggagattatgtaatagaacaaatgccagaggaaggaacg
atgttttcttctgaaggaggggaggtatggatttatcttggagacgataaagttaagtga
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