Amedibacterium intestinale 9CBEGH2: A9CBEGH2_03800
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Entry
A9CBEGH2_03800 CDS
T06427
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
absi
Amedibacterium intestinale 9CBEGH2
Brite
KEGG Orthology (KO) [BR:
absi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
absi03400
]
A9CBEGH2_03800 (sbcC)
DNA repair and recombination proteins [BR:
absi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A9CBEGH2_03800 (sbcC)
Archaeal homologous recombinant proteins
A9CBEGH2_03800 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
NACHT
Mg_chelatase
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BBK61440
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All DBs
Position
406580..409609
Genome browser
AA seq
1009 aa
AA seq
DB search
MLPEKLVIQAFGPYVEKQEIDFSDISSHHLFLIQGETGSGKTMLLDAITFALFGKSSGGQ
RESMEAMRSRFASDDIHTFVEFIFSLKGKRYRFVRKVEVKTKRNKEKVWKSSVDAGEIVN
GEFLPFFENPKLKNVEEKAEELIGLRYEQFVQVMVLPQGKFEQFLTSKSEEKQEILKTLF
QMEHWENINAWLVEYIKQEKQKLDDLQGKQQIYLETLKEESIEQAKATMDSLKTELEEKK
KELIKQNKKVACLEKELVEQKQRNEDEQAFETCRKELDTLQEKQVTINAQKEKLAHYKKL
QGILPYYHAYDTAAKQYEKRMQQSQLAYEKLKKIQEESSLEKERKQQVESLQKHEEICRK
TYQSLQEDMVLLKEIEILNKTWEEHQKQQKEILEKEENVSRLLEDTLRKKDAMQKDIQIL
KQELQSKEDIDNRHRKLEQAKILDEEKQSINIALEKEIQNQQMQEEKRKSYELEVETADA
KHEKVYQQYLQTAALQLSKDLEEGKPCPVCGSLHHPSYAHVSHMYVDLQELKTYKEKLEQ
AKEQYQKQKDLLKEINLSIQTKKQRCIQIDKEILQLLEKPFTNEEFETVQNNLQIMQKKE
KQWQNLLVDEQNIQNEIQRLYVLKSEYQNKSITYKEENSAYSATLKQKTSQLHSQDSMEV
IKKHYQQTEQKQKQYEKEIEMLQKQIEEVKLQEAAVKENYAHAQEEEKKAKEEKKQAEDR
FVKQCFTYGVEKEEIVEIPEENILLKMEESIQSYEQNVVEVSARKEMLEARLQKMESKDV
PALEEESEQARNGLKQLQEDTAKQRSQWELYRATLKKAEDTQRLIEVQMPKFLKKQHFVK
AMRGDNGVGIERYVLGVLLQTILQYANQLLRQVHDGRYQLYRSDEAIGRVRKSGLELGIY
DSYSMGQRSVVSLSGGEKFLVSLALSLATSFVVQSKNGGMQLDAMFIDEGFGTLDEHSIA
DALHILQTMTKRKGMVGIISHVEILKENIADGIEVCKTRKGSTIRFRKA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctgaaaaattagtaatacaggcgtttggaccttatgttgaaaaacaggaaatt
gatttttccgatatttccagccatcatttgtttttgatccagggagaaacaggaagtggg
aaaacgatgcttttagatgcgattacctttgcattgtttggaaaaagcagtggtggacaa
agggaaagtatggaagcgatgcgctctcgctttgcaagtgatgatatacatacatttgtg
gaatttatattttctttaaaagggaaacgatatcgttttgtgcgaaaagtagaggtaaag
acaaagcgaaacaaagaaaaagtatggaaaagcagtgtcgatgccggtgaaattgtaaat
ggagaatttcttccgttttttgagaatccaaaactaaaaaatgtggaggaaaaagcagaa
gaactgattggacttcgctatgaacagtttgtacaggtcatggtgcttccacaggggaaa
tttgaacagtttctgacaagcaaaagtgaagaaaagcaagaaatattaaagacattgttt
cagatggaacactgggaaaatatcaacgcgtggctggtagaatacataaaacaagaaaaa
cagaaactggatgatctgcagggaaaacagcaaatctatctggaaacgttaaaagaagaa
tctattgaacaggcaaaagcaactatggattctttgaaaacagagctggaagaaaagaaa
aaggaactcataaaacaaaataaaaaggtagcgtgtttggagaaagaacttgtagaacag
aaacaaagaaatgaagatgaacaggcatttgaaacgtgcaggaaagaactggatacatta
caagaaaaacaagttaccatcaatgcacaaaaagaaaagctggctcattataaaaaactg
cagggtattcttccttattatcatgcatatgatacagctgcaaaacaatatgaaaaaagg
atgcagcaatcccagttggcatatgaaaaactaaaaaagatacaagaggaaagttcttta
gagaaagagagaaaacagcaggtagaaagtttacagaaacatgaggaaatatgcagaaaa
acatatcaatctttacaggaagatatggtccttttaaaagaaatagagatactaaacaaa
acatgggaagaacatcaaaaacagcagaaagaaatactggaaaaagaagaaaacgttagt
aggcttttggaagatacgctaagaaaaaaagatgcaatgcagaaggatatacaaatatta
aaacaggaattacagagcaaagaagatatagataatagacatcgaaagctggaacaggca
aaaatactggatgaagaaaaacaaagtatcaatatagcattagaaaaagaaatccagaac
cagcagatgcaggaagagaagagaaaatcctatgaattggaagttgaaactgcagatgca
aaacatgaaaaagtgtaccagcagtatttacaaacagctgcgctgcagctttccaaagat
ttagaagaaggaaaaccttgtccggtatgtggttctttgcatcatccttcctatgcacat
gtttctcatatgtatgttgatttacaggaattaaaaacatataaagaaaaactggaacag
gcgaaagaacagtatcagaaacaaaaggacttactaaaagaaatcaacctttctatacaa
acgaaaaaacagcgttgtatacagattgataaagaaattttgcagttattggagaaacca
tttacgaacgaagagtttgagactgtgcaaaataatcttcaaataatgcagaaaaaagaa
aaacagtggcaaaacttgctggtggatgagcaaaatatacaaaacgaaatccaaagactg
tatgtattaaaaagtgaatatcaaaacaaatctatcacatataaagaagaaaacagcgca
tatagtgctactttgaaacagaaaacaagtcagctgcattctcaggattctatggaagtt
ataaagaagcactaccagcagacagaacaaaaacaaaagcagtatgaaaaagaaatagag
atgttacagaagcaaattgaagaagtgaaattacaggaagctgctgtgaaagaaaattat
gcacatgcacaagaggaagaaaaaaaggcaaaagaagaaaagaaacaggcagaagatagg
tttgtaaaacaatgttttacatatggagtagagaaagaagaaattgtagaaataccagaa
gaaaacatacttttaaaaatggaagagagcattcaaagctatgaacaaaatgttgtggaa
gtaagtgcacgaaaggaaatgttagaagcacgtttacaaaagatggaaagcaaggatgtt
cctgctttggaagaagaaagtgaacaggcaagaaatggattaaaacaactgcaggaagat
acggcaaaacaaagaagtcaatgggaattgtatcgagctacgttaaaaaaagcagaggat
acacaacgtcttatagaagtacagatgccgaaatttttaaagaaacagcactttgtaaaa
gcaatgcgtggcgataatggagtgggaattgaacgttatgtattaggtgtgcttctgcaa
acaattttacaatatgcaaatcagctgttgcgacaggttcatgatggaagatatcagctg
tatcgaagtgatgaagcgattggaagagtgcgaaaaagtggattagaactgggaatttat
gattcctattccatgggacagcgaagtgtggtatcgttaagtggaggagaaaagtttctg
gtatcacttgcattatcactggcaacctcttttgttgtgcagtcaaaaaatgggggtatg
cagctggatgcgatgtttattgatgaaggatttggtacattggatgaacatagtattgcg
gatgctttgcatatcttgcagacaatgacaaagcgaaaaggaatggttggaattatttct
catgtagagatattaaaggaaaatattgcagatggtatagaagtatgtaaaacaagaaaa
ggaagtacaattcgatttagaaaggcgtga
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