Amedibacterium intestinale 9CBEGH2: A9CBEGH2_05160
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Entry
A9CBEGH2_05160 CDS
T06427
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
absi
Amedibacterium intestinale 9CBEGH2
Pathway
absi03030
DNA replication
absi03430
Mismatch repair
absi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
absi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A9CBEGH2_05160 (holA)
03430 Mismatch repair
A9CBEGH2_05160 (holA)
03440 Homologous recombination
A9CBEGH2_05160 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
absi03032
]
A9CBEGH2_05160 (holA)
03400 DNA repair and recombination proteins [BR:
absi03400
]
A9CBEGH2_05160 (holA)
Enzymes [BR:
absi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A9CBEGH2_05160 (holA)
DNA replication proteins [BR:
absi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A9CBEGH2_05160 (holA)
DNA repair and recombination proteins [BR:
absi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A9CBEGH2_05160 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
IFT57
Hda_lid
HP_1247_M
HTH_37
Motif
Other DBs
NCBI-ProteinID:
BBK61576
LinkDB
All DBs
Position
541474..542418
Genome browser
AA seq
314 aa
AA seq
DB search
MNYVLYGEEQYRLKRTLETIVKEYLPDENDLNLIRYDAMHTDIAAIIEDAMTVPFFSSYK
VIIVDHANFLSTLNNTACDIKSLESYLQNPCDSTVLIFTGDFAKLDTRKKVVKTIKKTWK
VLEFKKLDELGKNSVVNEEIQKRKLNITGNAKQILLKRLPLDMETIQKEMDKLELYQGVL
DENVVSSLINRPLEEDVFQLVDAVVEKNKGKAFHIWQDLCVSNTDAIYLIALLAGQFRFL
FEVKNLMVKGYEKDEIAHALNAHPYRVKLSMEKARSLSIKSLMAMLDKLASLDQKLKSGL
LDKKLGFEMFLLEL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaattatgtgttgtatggagaggaacaatatcgtttaaaaaggactttggaaacgata
gtaaaagaataccttccggatgaaaatgatttgaatttaattcgttatgatgcaatgcat
acagatatagcagcgattatagaagatgctatgacagtgccttttttttcttcgtacaaa
gttatcatcgttgatcatgctaattttttgtcgaccttaaataatacagcatgtgacata
aaaagtttagagtcatatcttcaaaatccatgcgatagtacagttcttatttttacaggt
gactttgcaaagctagacactcgcaaaaaagttgtaaaaacaataaaaaaaacgtggaag
gttttagaatttaaaaagttagatgagcttggtaaaaatagtgttgtaaatgaagaaata
cagaaaagaaaactgaatattacaggaaacgcgaaacaaattctattaaaacggttacca
ttggatatggaaacgatacaaaaggaaatggataaactggaactttatcagggggttctc
gatgaaaatgtagtttcatctcttattaatagaccgttagaagaagatgtatttcaactt
gttgatgctgttgtagaaaaaaacaaaggaaaagcttttcatatatggcaggatttatgt
gtctcaaatacagatgcaatttatttgattgctcttttggcgggacagtttcggtttttg
tttgaagtcaagaatcttatggtaaaagggtatgaaaaagatgaaatagctcatgctttg
aatgcccatccatatcgtgtgaaactttccatggagaaagctagaagcttatctatcaag
tcattgatggctatgcttgataagcttgctagtttagatcagaaattaaaaagcggatta
ctggataaaaaacttgggtttgaaatgtttttattggagttatag
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