Amedibacterium intestinale 9CBEGH2: A9CBEGH2_06210
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Entry
A9CBEGH2_06210 CDS
T06427
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
absi
Amedibacterium intestinale 9CBEGH2
Pathway
absi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
absi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A9CBEGH2_06210 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
absi03021
]
A9CBEGH2_06210 (sigA)
Transcription machinery [BR:
absi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A9CBEGH2_06210 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BBK61681
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All DBs
Position
643570..644760
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AA seq
396 aa
AA seq
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MKKAKSKVLQEYKTLDEIKEELQEAYQKNNVLYQRDVVDAVEHLDMSDTEFDDLFQWFSD
HDIDIVNEDDDTDLMDDDALADEGSDDLDFLDDEDDDENSIASEIESLEQSFANSSHTKI
NDPVKMYLKEIGRVELLDPKEEPEIARRIQAGDEEAKKKLISANLRLVVSIAKKYVGRGM
LFLDLIQEGNMGLVKAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVET
INKLTRIQRQLVQDLGRDPTAEEIAAKMENISPEKVREIQKIALEPVSLETPIGEEDDSH
LGDFIEDKEALSPDEYANNQLLKDEINNVLQGLTEREEKVLRLRFGLYDGRTRTLEEVGK
EFNVTRERIRQIEAKALRKLKHPTRSKRLKDFVDKP
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcaaaatcaaaagttctgcaggagtataaaactttagatgaaattaaagaa
gaactgcaggaagcatatcaaaaaaataatgtactttatcaaagagatgttgtagatgct
gttgagcacttagatatgagtgatacagagtttgatgatttgtttcaatggttttctgat
cacgacattgatattgtcaatgaggatgatgatacagatttaatggatgatgatgcactt
gcagatgaaggcagtgacgatttagattttttggatgatgaagatgatgatgaaaattct
atcgcaagtgagattgaaagtcttgaacagtcttttgcaaattcttcacatacaaaaatt
aatgacccagtaaaaatgtatctaaaagaaatcggtcgtgtagagttgctggatcctaaa
gaagaaccagagattgctcgccgtattcaggcaggagatgaagaagcgaaaaagaaactg
atttctgctaaccttcgtctagttgtatccattgcaaaaaaatatgtaggacgtggaatg
ttatttttggatttgattcaagaaggaaatatgggtcttgtaaaggctgtagaaaagttt
gattatacaaaaggatttaagttctcaacatatgctacatggtggattcgtcaggctatt
acacgtgcaattgcagaccaggcaagaacaattcgtattccagtacatatggttgaaaca
atcaataaacttacaagaatccagcgtcagcttgttcaggatttaggaagagatccaact
gcggaagaaattgctgctaaaatggaaaatatttctcctgaaaaagttcgtgaaattcaa
aagattgctttagaaccagtatctttagaaactcctattggagaagaagatgattctcat
ttaggagactttatagaggataaagaagctttatcacctgatgaatatgcgaacaatcag
cttttaaaagatgaaattaataatgtgctgcagggattaactgaaagagaagaaaaagtt
ctaagacttcgttttggattatatgatggaagaacaagaactttagaagaagttggtaaa
gaatttaatgtaacacgtgaacgtattcgtcagattgaagcaaaagcattacgtaaatta
aaacatccaacccgctcaaaacgtttaaaggattttgttgataaaccttaa
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