Amedibacterium intestinale 9CBEGH2: A9CBEGH2_06430
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Entry
A9CBEGH2_06430 CDS
T06427
Symbol
hup
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
absi
Amedibacterium intestinale 9CBEGH2
Brite
KEGG Orthology (KO) [BR:
absi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
absi03032
]
A9CBEGH2_06430 (hup)
03036 Chromosome and associated proteins [BR:
absi03036
]
A9CBEGH2_06430 (hup)
03400 DNA repair and recombination proteins [BR:
absi03400
]
A9CBEGH2_06430 (hup)
DNA replication proteins [BR:
absi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A9CBEGH2_06430 (hup)
Chromosome and associated proteins [BR:
absi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
A9CBEGH2_06430 (hup)
DNA repair and recombination proteins [BR:
absi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
A9CBEGH2_06430 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BBK61703
LinkDB
All DBs
Position
664196..664480
Genome browser
AA seq
94 aa
AA seq
DB search
MSEILNKKTLVEVVAESCEITKKNATVAVDTVFEEITKTLAEGGKVDIAGFGKFEISERP
ERMGINPATKEPLKIAASKTPKFKAAKALKEAVK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattttaaataaaaaaacattagtggaagtcgttgcggaaagctgtgaaatc
actaagaaaaacgctactgttgcagtagatacagtatttgaagaaattacaaaaacacta
gctgaaggtggaaaagtggatattgctggttttggaaaatttgaaatcagtgaacgtcca
gaacgtatgggaattaaccctgcaacaaaagaacctttaaaaattgcagcttctaaaact
ccaaaatttaaagctgcgaaagctttaaaagaagcagtaaaataa
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