Amedibacterium intestinale 9CBEGH2: A9CBEGH2_06590
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Entry
A9CBEGH2_06590 CDS
T06427
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
absi
Amedibacterium intestinale 9CBEGH2
Pathway
absi03420
Nucleotide excision repair
absi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
absi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A9CBEGH2_06590 (pcrA_1)
03430 Mismatch repair
A9CBEGH2_06590 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
absi03400
]
A9CBEGH2_06590 (pcrA_1)
Enzymes [BR:
absi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A9CBEGH2_06590 (pcrA_1)
DNA repair and recombination proteins [BR:
absi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A9CBEGH2_06590 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
A9CBEGH2_06590 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
BBK61719
LinkDB
All DBs
Position
678540..680516
Genome browser
AA seq
658 aa
AA seq
DB search
MSTLQSENFTFSQIIKSKAQVCAIEGLSGCAKTEVYLQRIHALYEEGIPYSQMLNIAGSR
YKIKSNTIRFKQKWSEEEKYPSFITLYSFCYQLIKKYNAQHDIETWKAYKDLGSIVMRLV
KKHFNLDLSFEECECIMSKIALSKTSMMSEKEIQAIRIPNIDVDFAYLFKQYEKEKERLK
IYDFEDLLVHAFQLLSTTSLASLCSNIQYIHVDDAQELPFLAHLILHRLVNNEKQLHLFY
DEHQQLSLRHAADLQPLQALESTYASVERFELKTNYRNAPAILSLAESFYFHKDMEETQE
IEKDVCFYKGFQTETELYAYAEEKAKASQGKCLFLARNKEMLLPLMDLFVKNEINFQCPS
IKYFFKYSFITDMMHFFDLLTDPRNLLAFEAISSKLNIKCSEKTYQSIAEQLSQNDDFDV
YQAIMNANVKAEIKNGIRKYIENFRMIQNASSLAMFQFVLQKLEYRRFLIQENISLSHPA
MVAFQALCERYTDPKDVTTCLRTLASATYPDTARIILDSIDTCEIEECSEVYVMDMQQSL
FPLTEEDTERKRLYLAMMKAQDHLEFLFAKRVGNTRLRPSSFLLELFKKPEKENVAPQNV
ERQAPALPRRGRKIMHESLGEGTILKLDNHLATIRFANQNERTLNLTFCLNNGLAKLL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagtacactacaatcagaaaattttacatttagtcaaattataaagagcaaggcacag
gtttgtgccattgagggattaagcggatgtgctaaaactgaagtttatttacagcgtatc
catgctttatatgaagaaggaataccatattcacaaatgttaaatattgctggttctcgt
tataaaatcaaaagcaatacgattcgctttaaacagaagtggagtgaagaggaaaaatac
ccttcttttattaccttgtatagtttttgttatcagcttattaaaaagtacaatgcgcag
catgatatagaaacatggaaagcgtataaagaccttggttctattgttatgcgccttgta
aaaaaacattttaatttagatttatcttttgaagaatgtgaatgtattatgagcaagatt
gctttatctaaaacaagcatgatgagtgagaaagaaatacaggcaattcgtattccaaat
atagatgtagattttgcttatttgtttaaacagtatgaaaaagaaaaagaacgtttgaaa
atttatgattttgaagatttgctggtacatgcatttcagcttttatcaacaacatctttg
gcttcgctttgttcaaacattcaatatattcatgtagatgatgcacaggaactccctttt
ttggcgcatttgattttgcatagattagtgaacaatgaaaaacagcttcatttattttat
gatgaacaccagcaattgtctttgcgtcatgcagctgatttgcagccgcttcaggcatta
gaatcaacctatgcgtctgtggagcgatttgaattaaaaacaaactatcgaaatgctcct
gctattttgtcacttgctgaatctttttatttccataaagatatggaagaaacacaggaa
atagaaaaagatgtttgcttttataaaggatttcaaacagaaacagaactgtatgcctat
gcagaagaaaaagcaaaagcttctcaagggaaatgtctgtttttagcaagaaacaaagag
atgctgcttccattgatggatttatttgtaaagaatgaaattaattttcaatgtccatcg
atcaaatactttttcaaatattcttttattaccgatatgatgcacttttttgatttattg
acagatcctagaaatcttttggcatttgaagctatttcatctaaattgaatataaaatgc
agcgaaaaaacataccagagcattgcggaacaattatcacaaaatgatgattttgatgta
tatcaggcgattatgaatgcaaatgtaaaggctgaaataaaaaatgggattcgtaaatat
attgaaaatttccgtatgattcaaaatgcatccagtcttgctatgtttcagtttgtttta
caaaagctggaatatcgacgttttttgattcaggaaaatatttccttatcacatcctgct
atggttgctttccaggcattgtgtgaacgttatacagatccaaaagatgtaactacatgt
ctgcgtacacttgcttctgcaacctatccagacacagcacgtattatccttgatagtatt
gatacttgtgaaatagaggaatgtagcgaagtttatgtaatggatatgcagcagtctttg
ttccctttaactgaagaggatacagaaagaaaaagactttatctggcaatgatgaaggca
caggatcatttggaatttttatttgcgaaacgtgtgggaaatacaagattaagaccatca
tctttccttttagaacttttcaagaagcctgaaaaagaaaatgtagcaccacaaaatgtt
gaaagacaagcacctgcacttccaagaagaggacgtaaaatcatgcatgaatctttagga
gaaggaacaattttaaaattagataatcatttagctacgattcgttttgctaatcagaat
gagcgtacattaaaccttacattttgtttaaataatggattagctaaattattataa
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