Amedibacterium intestinale 9CBEGH2: A9CBEGH2_12090
Help
Entry
A9CBEGH2_12090 CDS
T06427
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
absi
Amedibacterium intestinale 9CBEGH2
Pathway
absi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
absi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9CBEGH2_12090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
absi03019
]
A9CBEGH2_12090
03009 Ribosome biogenesis [BR:
absi03009
]
A9CBEGH2_12090
Enzymes [BR:
absi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A9CBEGH2_12090
Messenger RNA biogenesis [BR:
absi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A9CBEGH2_12090
Ribosome biogenesis [BR:
absi03009
]
Prokaryotic type
rRNA helicases
A9CBEGH2_12090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
AAA_22
DUF3502
Rep_fac_C
Motif
Other DBs
NCBI-ProteinID:
BBK62269
LinkDB
All DBs
Position
complement(1198538..1200256)
Genome browser
AA seq
572 aa
AA seq
DB search
MTTFNELNISSEVKRAVEEMGYENATDIQARAIPCILEGKDVLGRSNTGTGKTAAFGIPA
IEMVNPGCKYPNALIICPTRELVTQVATELRKFSKYKEGIKIVPIYGGQPIERQIQLLKR
GCGIVVGTPGRIMDHLNRRTLKLVDTNMVILDEADEMLNMGFKEDIEEILSMMPEDKEHQ
TILFSATWPQDILKITEQFQKDPIRVEIKSAQRTIDTVEQVYYEAPRGKKTNALRVLLNH
YDPELCMIFCNTKKMVDELNDELNNHGIKSISLHGDMKQEFRSRVMEQFRSGNFPILIAT
DVAARGIDVDDIDLVINYDIPQDNEYYIHRVGRTGRAGRKGVAITLISGNKQRKALRDII
HYTKTNIVRHALPTSAQMMEANRNAFLAKVKEACDEGVTEESMEIANELMADGIALENII
SALISMTYKNEVIDIEEEEKVKNYASEFDAITLKFNVGRAHGIKPGNIVAAISEESGISS
KAIGHIDVRKEFSLVDIAAEKVDLVLTSMQRSRIRKQEVMVEIDSAPKRKRNRRKEDKKS
NEDKKNTRNHSRRKADESIRKNRKKDKKGSRR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatttaatgaattgaacattagcagcgaagtaaaaagagctgttgaagagatg
ggatatgaaaatgctaccgacatacaggcacgtgccattccatgtatcttggaaggaaaa
gatgtgctaggtcgttcaaatacaggaacaggtaaaacagccgcatttggtatcccagcc
attgaaatggtaaatccgggatgcaagtatccaaatgctttgattatttgtccaacaaga
gagctggtaacacaggtcgctacagaattaagaaagttttccaaatataaagaaggaatt
aaaatcgttcctatttatggaggacagccaattgaacgtcagattcagttgctgaaaaga
ggttgtggtatcgttgtaggtactccaggaagaatcatggatcatttaaatcgccgtaca
ttaaaactggtagatacaaatatggttatcctagatgaagcagatgaaatgttaaacatg
ggatttaaagaagacattgaagaaattctttccatgatgccagaagacaaagaacatcaa
acgattttattttctgctacatggccacaggatatcttaaaaataacagaacagtttcaa
aaagatcctatacgtgtagaaattaagagtgcacaaagaaccattgatacggtagaacag
gtgtattatgaagcaccgcgtggcaagaaaacaaatgctctgcgtgtacttttaaatcat
tatgatcctgagctttgtatgattttctgtaatacaaagaaaatggtagatgaattaaat
gatgagttaaataatcatggaattaaatctatttctttgcatggagatatgaaacaggaa
tttagaagtcgtgtaatggaacagtttagaagcgggaacttcccaattttgattgcgaca
gatgtagcagcacgtggtattgatgtggatgatattgatttggttatcaactatgatatt
cctcaggataatgaatattatattcatcgtgttgggcgtactggacgtgcgggaagaaaa
ggggttgcgattacactaattagtggaaataaacagcgaaaagcattgcgtgatattatt
cactatacaaaaacgaatatcgttcgtcatgctttacctacttctgcacagatgatggag
gcaaatcgcaatgccttccttgcgaaagtaaaagaagcatgtgatgaaggtgtaacagaa
gaaagtatggaaattgcaaatgaattgatggcagatggtattgcgttagaaaatattatt
tctgcacttatttccatgacatacaaaaatgaagtaatcgatattgaggaagaagaaaaa
gtaaaaaattatgcttctgaatttgatgccattactttaaaattcaatgtgggaagagca
catggaattaaaccgggaaatattgttgcggcaattagtgaagaaagtggtattagttcg
aaagcaattggacatattgatgtacgaaaagaattctctttggtagatatcgcggctgaa
aaagtagatcttgttttaacaagcatgcaaagaagtcgtattcgtaaacaggaagttatg
gtagaaattgacagtgctccaaaacgaaaaagaaatcgtcgcaaagaagataagaaatcg
aatgaagataaaaagaatacaagaaatcactctcgcagaaaagcagatgaaagtattcgt
aaaaatagaaaaaaagataaaaaaggttctcgtcgctag
DBGET
integrated database retrieval system
