Amedibacterium intestinale 9CBEGH2: A9CBEGH2_12250
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Entry
A9CBEGH2_12250 CDS
T06427
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
absi
Amedibacterium intestinale 9CBEGH2
Pathway
absi03030
DNA replication
absi03430
Mismatch repair
absi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
absi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A9CBEGH2_12250 (polC)
03430 Mismatch repair
A9CBEGH2_12250 (polC)
03440 Homologous recombination
A9CBEGH2_12250 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
absi03032
]
A9CBEGH2_12250 (polC)
03400 DNA repair and recombination proteins [BR:
absi03400
]
A9CBEGH2_12250 (polC)
Enzymes [BR:
absi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A9CBEGH2_12250 (polC)
DNA replication proteins [BR:
absi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A9CBEGH2_12250 (polC)
DNA repair and recombination proteins [BR:
absi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A9CBEGH2_12250 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
RNase_H_2
DNA_pol3_a_NI
tRNA_anti-codon
HHH_3
DNA_pol_A_exo1
DUF6282
T2SSK
PHP_C
Motif
Other DBs
NCBI-ProteinID:
BBK62285
LinkDB
All DBs
Position
complement(1217912..1222243)
Genome browser
AA seq
1443 aa
AA seq
DB search
MELKLVDLVKRMEKDNPDTAYFEKGSFLMKPVYKKNSHVLHMEISLPKPLPYKVWDVFCV
RLKKITQCQVALKIQTENAQTSILELSDYISHFVSFHPALRIFQDSLPSLENQHLIYHIA
QEDERDVAIQNKHLLKEFLDSCGFELKIDIEEMKVSQKVLEVKMKKEEPKPVKVYEEKKA
YNFKPKGKKGLENYVPFSICDIKEECHDIRIHGKIFEIENRTLRTGKDIQTLWIADDDDA
IIMKRFERGAVTKEVLNEISKGDCVVADGKVEFDSYSRELVFMPDVLQKVAEVKRVDEAE
EKRVELHVHTKLSEMDGVCDIAEFIKTADEWGMDAIALTDHRVVQAFPTAQSVVDGINKK
REKPMKILYGVEMNMVDPVLQIVRNADDTKLEEGTYCVFDLETTGLSSRYDHIIEFGGQI
VKDRTCIKSLQMFIKPPVELSAFTTELTNISEEHVRNAKPFVECVDEILEFIGDSILVAH
NASFDYGFLNAELERIGRKPLMNPVIDTLDLARSMVDRKGYRLGQLARQYGIRYDEDVAH
RADYDAEVLAQVFMHMLNELKHIPTLRDLQAMQDETCLNKVRDKHVTILAKNMAGLKELF
ELITLSHTKYLSYNSKSTTNVVAEPRIIRSEIEKRRMNGNLLIGSSCVNGEVFDIAQTRS
EKELEEVMRFYDYIELQPLGNYQFLIDRNSISDENRLKEILTGIIEKADALHKPIVASSD
AHYVHPNQKLIRDIYINSQAIGGMRHPLYIYNQEKRRRFQSPMQHMRTTQEMLKEFAWLG
EKRAYEFVVTNTRKIADEVEIIRPVKDALYPPDIEGSDQKLREICFENAHKKYGPQLPKI
VEDRLNRELDAIIGAGYYVVYYISHLLVKKSLDDGYLVGSRGSVGSSFVATMSEITEVNP
LAPHYVCPKCHYVKFFTDGSVLNGYDLPDIECPHCGEIIRGDGHDIPFETFLGFEGDKVP
DIDLNFSGEYQPNAHAYTKEVFGEDHVYRAGTIGTVAEKTAFGYVKGYEEEMGIEGSMRN
AQILRLAKGCEGVKRTTGQHPGGIVVVPLDMDVHDFTPVQYPANDPYAEWKTTHFDFHQI
HDNILKFDILGHVDPTAMKMLERMSGIDVRTIPMNDPETMSIFSGVDALCIDTSKNTEET
GAAGLPEYGTPFVRGILELTRPTTFDELLKISGLSHGTDVWLGNAKDLIDEGICTLKSVI
GCRDDIMVYLLYKGLKPKSAFTIMESVRKGKGLKDEWIVEMKENGVEDWYIESCKKIKYM
FPKAHAVAYVMMAIRIAWFKVHKPQYYYCMFFSIRCDAYDIETMIKGEQSIRKKMQEIDM
KLRDNNLKKDVTKKDKDIYSTLELALEMVLRGYSFTNIDLMRSTSKEFIVDPTNTKRLIP
PFTSIDGLGESVADTVVEARKNGAFLSKEDLQRRTSLSGTLVKKLESMGVLEGLQEENQM
SLF
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggagctaaaattagttgatcttgtgaagaggatggagaaagataacccagatactgcg
tattttgaaaagggttcttttcttatgaaaccagtgtataagaaaaattctcatgttctt
catatggaaatatctttgcccaaacctttgccttataaggtatgggatgttttctgtgtg
agattaaagaaaattacacaatgccaggttgcattaaagatacaaacagaaaacgctcag
acatcgattttagagttaagcgactatatatcgcattttgttagttttcatccagcttta
cgtatttttcaagattctttgccatcattagaaaatcagcatttgatttatcatattgca
caggaagatgaaagggatgtagctattcaaaataaacatttattaaaagagtttttggat
tcctgtggatttgagttaaaaattgatatagaagaaatgaaagtttctcaaaaagtgtta
gaagtaaaaatgaaaaaagaagagccaaaaccagttaaggtatatgaggaaaagaaagca
tataactttaaaccaaaagggaaaaaaggattggaaaactatgttcctttttctatttgt
gatattaaagaagaatgtcatgatattcgaattcatgggaaaatctttgaaattgaaaat
cgtacacttcgtacaggaaaagatattcagactttatggattgcggatgatgatgacgct
atcatcatgaaacgttttgaacgtggagcagtaacaaaagaagtgttaaacgaaatttcc
aaaggggattgtgttgttgcggatggaaaagtggaattcgattcttattccagagaactt
gtatttatgccggatgtattgcagaaagtggcagaagttaaacgtgttgatgaagcagaa
gaaaaacgtgtagaactgcatgtacataccaagttgtctgagatggatggtgtttgtgat
atagcggagtttatcaaaacagcagatgaatggggtatggatgccattgcgttaacggat
catcgtgtagtgcaggcttttcctactgcacaatcggttgtggatggtataaataaaaaa
cgagaaaaaccaatgaaaattttatatggtgtggaaatgaatatggtagaccctgtatta
caaattgtgcgtaatgcagatgatacaaaactggaagagggaacgtattgtgtgtttgac
cttgaaacaacggggttatcttctcgttatgaccatatcatagaatttggtggacaaatc
gttaaggatcgtacatgtatcaaaagtttacagatgtttataaaaccacctgtagaattg
agcgcatttacaactgagttaacaaatatcagcgaagaacatgtaagaaatgcgaaacct
tttgtagaatgtgtggacgaaatcttagaatttattggggatagtattctggtagcacat
aatgccagctttgactatgggtttttaaatgctgaacttgaaagaattggaagaaaacca
ttgatgaatcctgtaattgataccttggatttggctagaagcatggtagatcgcaaagga
tatcgtttgggacaattggcacgtcaatatggaattcgctatgatgaagatgttgcccat
cgtgcggattatgatgcagaagtgctggcacaggtattcatgcatatgttaaacgagtta
aagcatataccgaccttaagagatttacaggcaatgcaggatgaaacttgtttaaataaa
gtaagggataaacatgtgacgatattggcaaaaaatatggctggtttaaaagaacttttt
gaattaattactttatcgcatacaaaatatctaagttataattcgaaaagtacaacaaat
gttgtagctgaaccacgtatcattcgttctgagatagaaaaaagaagaatgaatggaaac
ttattgattggttcttcctgtgttaatggggaagtctttgatattgcgcagacacgaagc
gaaaaagaacttgaagaagttatgcgtttttatgactatattgaactgcagcctttagga
aactatcagtttttaattgatcgaaattccataagtgatgaaaatcgcttaaaagaaatt
cttacaggaatcatagaaaaagcagatgctttgcataagccaattgtcgcaagcagtgat
gctcattatgtacatccaaatcaaaaactaattcgcgatatttatatcaattcacaggca
attgggggtatgcgtcatcctctgtatatttataatcaggaaaaacgtcgtcgttttcaa
agtccaatgcagcatatgcgtacaacacaggaaatgttgaaagaatttgcgtggcttggg
gaaaaacgtgcttatgagtttgtcgtgacaaatacaaggaaaattgcagatgaagttgaa
attatccgtcctgtgaaagatgctttatatccaccagatattgaaggatctgatcaaaaa
ctgagagaaatttgttttgagaatgcacataaaaagtatggaccgcagcttcccaaaatt
gtagaagatcgactaaacagagaactggatgccatcattggggcaggttactatgttgtt
tattatatttcccatctattagtaaagaaaagtttggatgatggatatctggttggttct
cgaggatctgtaggttctagttttgttgcgaccatgtcggaaattacggaagtaaaccca
ttagcaccgcattatgtttgtccaaaatgtcattatgtaaaattctttacagatggaagt
gtattgaatgggtatgacttaccagatattgaatgtccgcattgtggagaaattattcgt
ggagatggacatgatattccatttgaaacctttttgggatttgaaggggataaggtgcca
gatatcgacttgaacttctcaggagaatatcagccaaatgcacatgcatatacaaaagaa
gtattcggagaagaccatgtgtatcgtgctggaacgattggtacggtggctgaaaaaaca
gcttttggatatgtaaaaggatatgaagaggaaatgggtattgagggtagtatgcgaaat
gcacagattcttcgacttgcgaaaggctgtgaaggggtcaaacgaacaacgggacagcat
cctgggggaattgtcgttgtgccattggatatggatgttcatgattttacaccggtacaa
tatcctgccaatgatccatatgcagaatggaaaactacacattttgatttccatcagatt
catgacaatatcttaaaatttgatattttaggacatgttgacccaacagcgatgaaaatg
ctggaaagaatgagtgggattgatgttcgaacgattcctatgaacgatccagaaacaatg
agtattttttccggtgttgatgctttgtgtattgatacttcaaaaaatacagaggaaaca
ggagcagccggacttccagaatatgggacaccatttgtacgtggaattctagagctgaca
cgtcctacaacctttgatgagcttttgaaaatatctggactgtcacatggtacggatgta
tggcttggaaatgcgaaagatttgattgatgaagggatttgtacattaaaaagcgttatc
ggttgtcgtgatgacatcatggtatatttgctgtataaaggattaaaaccaaaatctgcc
tttacgattatggaaagtgtgcgtaaaggaaagggattaaaagatgaatggattgtagaa
atgaaggaaaatggagtagaggactggtatattgagtcttgtaagaagattaaatacatg
ttccctaaggcccatgcggttgcctacgttatgatggctataagaattgcatggtttaaa
gtgcataagccgcaatattattattgtatgttcttttctattcgttgtgatgcctacgat
atagaaacgatgatcaagggagaacagtctatacgtaaaaaaatgcaggaaattgatatg
aaactgcgagacaataatttaaagaaagatgtaacaaagaaagataaagatatttattct
actttggaacttgcgcttgaaatggtacttcgaggctactcttttacaaatattgattta
atgcgctctacttcaaaagaatttattgtagatcctacaaatacgaaacgtttgattcct
ccgtttactagtattgatggtttgggagaaagtgttgcggataccgttgtagaagctaga
aaaaatggagctttcttatcaaaagaagatttgcaaagacgaacttcattaagtggtacc
ttagtaaaaaaactggaatctatgggagttttagaaggtctccaggaagaaaatcaaatg
agtttattttag
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