Amedibacterium intestinale 9CBEGH2: A9CBEGH2_14450
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Entry
A9CBEGH2_14450 CDS
T06427
Name
(GenBank) hypothetical protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
absi
Amedibacterium intestinale 9CBEGH2
Pathway
absi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
absi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A9CBEGH2_14450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
absi03000
]
A9CBEGH2_14450
Transcription factors [BR:
absi03000
]
Prokaryotic type
Helix-turn-helix
Other families
A9CBEGH2_14450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
DUF3890
Spore_II_R
HTH_31
Pathogen_betaC1
Motif
Other DBs
NCBI-ProteinID:
BBK62505
LinkDB
All DBs
Position
complement(1450693..1451394)
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AA seq
233 aa
AA seq
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MDKRIGTYIRKARIEKSYSQEGLCKGICAVSYLSKIELGQVHASQEIIQMLFQRLDLYYE
TDSAYLKEVKQSIEECYHLLFHAFDISKLKEKVLNLKKNEKRLSSSPFFLDFYLLENISI
LMKKDIPSLQTVQEESIQNSLHSLEEYIETMDQRQYELYTLSNALLYEKEELFEKVVKLN
PCAFYTDVYGSWLFIKGKYVRAVELLQRAYDNALQEGSLYLALDAKFSQGMCR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggataaacgcataggaacatatattcgtaaagcacgtattgaaaagtcatattcacag
gaaggattgtgtaaagggatttgtgcagtatcttatttatcaaaaattgaacttggacaa
gtacatgcatcacaggaaatcattcaaatgctttttcagcgtttagatttatattatgaa
acagattcggcatatttaaaagaagtaaaacagagtatagaggaatgttatcatcttctt
tttcatgcatttgatataagtaagttgaaagaaaaagttttaaatttaaagaaaaatgaa
aaacgactttcttcttctcctttctttttagatttctatttattagagaatataagtatt
cttatgaaaaaagatattccatctttacaaacagttcaagaagaatccatacaaaacagt
cttcattcgttagaagaatatatagaaactatggatcagcgccagtatgaattgtatact
ttatcaaatgcgcttttgtatgagaaagaagaattatttgaaaaagtagtaaaattaaat
ccctgtgctttttatacagatgtttatggttcctggctgtttataaagggcaagtatgta
cgtgcagtggaacttcttcaaagagcctatgataatgctttacaggaaggaagcttgtat
ttggcattagatgcaaagttttctcaaggtatgtgtagatga
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