Amedibacterium intestinale 9CBEGH2: A9CBEGH2_23680
Help
Entry
A9CBEGH2_23680 CDS
T06427
Symbol
pcrA_2
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
absi
Amedibacterium intestinale 9CBEGH2
Pathway
absi03420
Nucleotide excision repair
absi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
absi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A9CBEGH2_23680 (pcrA_2)
03430 Mismatch repair
A9CBEGH2_23680 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
absi03400
]
A9CBEGH2_23680 (pcrA_2)
Enzymes [BR:
absi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A9CBEGH2_23680 (pcrA_2)
DNA repair and recombination proteins [BR:
absi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A9CBEGH2_23680 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
A9CBEGH2_23680 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
ResIII
LETM1_C
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
BBK63428
LinkDB
All DBs
Position
2428755..2430956
Genome browser
AA seq
733 aa
AA seq
DB search
MSFLDGLNKQQKEAAQCVDSHLRIIAGAGSGKTRVVTTRIAYLVEELHVLPNKILAITFT
NKAAKEMKERVESMLGDIGKAVQISTIHSFCVRLLREDILEIAYPRNFTILDGDDQKSIL
RDAYKQMNIDVKAYSYSSMLAYISGNKTNFVDCDMAKASAGVWDAEQIKADVYAFYEKRR
KEMYALDFDDLLLYTHKILKEKEDVRRKWQRRFSFIHVDEFQDVDMLQYDIIRMLVKDGS
YLCVVGDPDQTIYTWRGAQVDIIMNFEKDFPDSKTVILNENYRSTQQILNGANALIKNNK
NRIDKELFTERKGEHKIVHFSAMDDANEPLWVVSKIRTLAQEGISYGDIAVLYRSNYLSR
GLEKCLLDFRIPYRIYGGIRFYDRAEIKDSLSYLRLLTPSNPEDPKELYKNLAIKRIINL
PKRGIGNKTMELIETQAEHDDTNMYEIIKNYEIGKGKAKTSLQAFVQLIEKYRAQVDKIS
IDQLLEQLLEESGYLHMLREDKEIERLENIKELISDISDYVEAYPEGTLQEYLQEISLYT
DKEDTSQRDCVQLMTIHAAKGLEFDHVFVYNLCEGVFPSERSIAEGGAQALEEERRLAYV
AFTRAKKRLFLSDSYGYSFVLDKVKTSSRFVKEIPEEYIEEVGAKPRNTFTSDTDTFNGN
DFLSMHSSFETKNTQAENKPVKKGKIRKGDLITHDVFGDGVVIKLEDKLATIAFDKKFGI
RKIMIDHPALKKK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtttttagatggattgaataaacagcaaaaagaggctgcacagtgtgtagattct
catcttcgtattattgcgggagccggaagtgggaaaacccgtgtggtaacgaccagaatt
gcatacctggtagaagaattgcatgtattgccgaataagattctggcaattacatttaca
aataaggccgcaaaagagatgaaagagcgtgtagaaagtatgctgggggatataggaaag
gccgttcaaatatccacaattcactctttttgtgtgcgtttattaagagaagatatatta
gaaattgcatatcctagaaactttacgattttagatggtgatgatcaaaaaagtatttta
cgagatgcatataaacagatgaatatcgatgtgaaagcatatagttacagcagtatgctt
gcctatattagcggaaataaaacaaactttgtagattgtgatatggcaaaagcaagtgca
ggggtttgggatgcagagcaaattaaggccgatgtatatgcattttatgaaaagcgaaga
aaagaaatgtatgctttggattttgatgatttattgctgtatacacataagattttaaaa
gaaaaagaagatgtgcgaagaaaatggcagagaagattttcttttatccatgtagatgaa
tttcaagatgtggatatgctgcagtatgatattattcgtatgctggtaaaagatggcagt
tatttatgtgtggtaggagatcctgatcagacgatttatacatggcgtggtgcacaggtt
gatatcatcatgaattttgaaaaggattttcctgatagtaaaaccgttatcttaaatgaa
aattatcgctctacacagcaaattttaaatggagcgaatgctttaataaaaaataataaa
aatcgtattgataaagaattgtttacggaaagaaaaggggaacataaaattgttcatttt
tccgcaatggatgatgcgaatgaacctttatgggtcgttagcaagattcgcacactcgca
caggaaggtatttcttatggagatattgcggttttgtatcgttccaattatttatcaaga
gggttggaaaaatgcctgctggattttcgtattccttatcgtatttatggaggaattcgt
ttctatgatcgtgcagaaatcaaggattctttaagttatcttcgtttattgacaccttca
aatccagaagatccaaaagaattgtataaaaatcttgcgatcaaacgtatcattaatttg
ccaaagcgtggaatcggaaataagacaatggaacttattgaaacacaggcagagcatgat
gataccaatatgtatgaaatcattaaaaattatgagattggaaaaggaaaagcgaaaaca
agcttgcaggcttttgtacagcttattgaaaaatatagagcacaggtggataagatttcc
atcgatcagcttttggaacagcttttagaagaaagcggatatttacatatgctaagagaa
gataaggaaattgagcgattggaaaatatcaaggaacttatcagtgatatatcagattat
gtagaggcatatccagaaggaactttacaagaatacttgcaggagatttctttgtataca
gataaagaagatacttctcaaagggattgtgtacagctgatgaccattcatgccgcaaaa
ggtctggagtttgatcatgtgtttgtatacaacttatgtgaaggggtgttcccaagtgag
cgcagtattgcggaagggggagcacaagcactggaagaagaaagacgacttgcttatgtt
gcctttacacgtgcaaagaaacgcttgtttttatcagattcttatggttatagttttgta
ttggataaagtaaaaacctcttcacgttttgtaaaagaaataccagaagaatacatagaa
gaagttggtgctaaaccacgaaacacttttacaagtgatacagatacctttaatggaaac
gattttctttccatgcattcctcttttgaaacaaaaaacacacaggcagaaaataaacct
gtaaaaaaaggaaagattcgaaaaggggatttaattacgcatgatgtatttggtgatggt
gtggttattaagctggaagataaactggctacgattgcctttgataaaaaatttggaatt
cgtaaaattatgatcgatcatccggcattaaagaaaaaatag
DBGET
integrated database retrieval system
