Aliarcobacter butzleri ED-1: ABED_0003
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Entry
ABED_0003 CDS
T01823
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
abt
Aliarcobacter butzleri ED-1
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abt03032
]
ABED_0003
03400 DNA repair and recombination proteins [BR:
abt03400
]
ABED_0003
Enzymes [BR:
abt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABED_0003
DNA replication proteins [BR:
abt03032
]
Prokaryotic type
DNA Topoisomerases
ABED_0003
DNA repair and recombination proteins [BR:
abt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABED_0003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
EF_HD
Motif
Other DBs
NCBI-ProteinID:
BAK69720
LinkDB
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Position
2567..4888
Genome browser
AA seq
773 aa
AA seq
DB search
MSQQEYGASNIKVLKGLEAVRKRPGMYIGDTNINGLHHLVYEVVDNSIDEAMAGFCRNIK
VTLTKDGWARIEDDGRGIPTAIHPTEGISAATVALTVLHAGGKFDKDTYKVSGGLHGVGV
SVVNALSKHLKMTVYREGKIHYQEFKEGIPQGTLEIIGDSPRKTGTTIEFLVDDSIFEVT
KYEFNILKKRFKEVAYLNPIISITLEDEAAKLKEVYHFEGGIKQFVADMNKETALCEVIS
FSDRVEGVEVDIAMMYNDTYIEKTLSFVNNIRTIDGGTHEAGFKAGLTRSISKYLSENAA
AREKDTKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIAQKLTGDNLDKYFE
ENPTHAKAIMEKALMAARGREAAKKARELTRKKDAMTVGTLPGKLAECQSKDPAIRELYL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSRLDKILKSDEIRNMITALGCGIGEDF
DEEKIRYHKIIIMTDADVDGSHIQTLLLTFFFRFLRPVIEKGYLYIAQPPLYRYKKGKNE
IYLKDNNALSAFLIENGLESFEFEGLGYNDLLDLFKIVSKYRAMLEQLGKRYSLLEVLKH
LIENSDLVNLEFKDLYENIKDFLDKKGYNILSKTVLDDRIQLFVQTNEGLEELIIDEELF
ASPYFSEATYIYSKLKERDLSVFEGRDLIEILEEIETLAKKGAYIQRYKGLGEMNPEQLW
ETTMIPDNRRLLRVKIEDAEVASDTFTLFMGDEVEPRRNYIEEHAKDVEHLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaagaatatggtgctagtaatattaaagttttaaaaggtcttgaagctgtt
agaaaaagaccaggtatgtatattggtgatactaatataaatggtttacatcacttagtt
tatgaagtagttgataactctattgatgaggcaatggctggattttgtagaaatataaaa
gtaactttaacaaaagatggatgggcaagaattgaagatgatggaagaggtattccaact
gcaattcacccaacagaaggaattagtgcagcaactgttgctttaactgtacttcatgct
ggtggaaaatttgataaagatacatataaagtttctggaggacttcatggtgttggggtt
tctgttgtaaatgctttatcaaaacacttaaaaatgacagtttatagagaaggaaaaatt
cattatcaagaatttaaagaaggaattcctcaaggaactttagaaataattggtgatagt
ccaagaaaaactggaacaacaattgaatttttagtagatgattctatttttgaagtaaca
aaatatgaatttaatatcttaaaaaagaggtttaaagaagttgcttacttaaatccaatt
atttctataacattagaagatgaagcagcaaaactaaaagaagtttaccattttgaaggt
ggaataaaacaatttgttgctgatatgaataaagaaacagctttatgtgaagttatatct
tttagtgatagagttgaaggtgtagaagttgatattgctatgatgtataacgatacttac
atagaaaaaactttatcatttgtaaataatattagaactattgatggtggaactcatgaa
gctggatttaaagcaggacttactagaagtatttctaaatatttaagtgaaaatgcagca
gcaagagaaaaagatacaaaaattactggagatgatgtaagagaaggtttaatagcagta
gtttctgtaaaagttcctgaacctcaatttgaaggtcaaacaaaaggaaaattaggaagt
tcttatgtaagaccaattgctcaaaagttaactggagataatttagataagtattttgaa
gaaaatccaactcatgcaaaagctattatggaaaaagctttaatggctgcacgtggaaga
gaagccgctaaaaaagcaagagaattaactagaaaaaaagatgcaatgacagttggaaca
cttccaggtaaacttgcagagtgtcaaagtaaagatccagcaattagagaattatattta
gttgagggagattcagcgggtggttctgcaaaacaaggaagagatagagttttccaagca
attttaccgttaaaaggtaaaattttaaatgttgaaaaatctagacttgataaaatttta
aaatcagatgagattagaaatatgattactgcacttggttgtggtattggtgaagatttt
gatgaagaaaaaatcagatatcataaaattatcattatgacagatgccgatgttgatggt
agccatattcaaacattacttttaactttcttctttagatttttaagaccagttattgaa
aaaggttatttatatattgctcaaccaccactttatagatataaaaaaggtaaaaatgaa
atttatttaaaagataataatgctttatctgcatttttaattgaaaatggtttagaatca
tttgaatttgaaggtttaggatataatgacttattagatttattcaaaattgtttctaaa
tatagagcgatgttagagcaattaggaaaaagatactctttacttgaagttttaaaacat
ttaattgaaaatagtgatttagtaaatttagagtttaaagatttatatgaaaatataaaa
gatttcttggataaaaaaggttataacattttatctaaaacagttcttgatgatagaata
caactttttgtgcaaacaaatgaaggattagaagaactaattattgatgaagaattattt
gcatcaccatattttagtgaagcaacttatatttatagtaaattaaaagagagagattta
tctgtatttgaaggtagagatttaattgaaatattagaagagatagaaacattagctaaa
aaaggtgcttatattcaaagatataaaggtcttggagagatgaatccagagcaattatgg
gaaactactatgattcctgataatagaagacttttaagagttaaaatagaagatgctgaa
gtagcaagtgatacatttactttatttatgggtgatgaagtagaacctagaagaaattat
attgaagaacacgcaaaagatgttgaacatttagacgtatag
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