Aliarcobacter butzleri ED-1: ABED_0472
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Entry
ABED_0472 CDS
T01823
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
abt
Aliarcobacter butzleri ED-1
Pathway
abt03030
DNA replication
abt03430
Mismatch repair
abt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABED_0472
03430 Mismatch repair
ABED_0472
03440 Homologous recombination
ABED_0472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abt03032
]
ABED_0472
03400 DNA repair and recombination proteins [BR:
abt03400
]
ABED_0472
Enzymes [BR:
abt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABED_0472
DNA replication proteins [BR:
abt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABED_0472
DNA repair and recombination proteins [BR:
abt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABED_0472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DEDDh_C
PG_binding_5
Motif
Other DBs
NCBI-ProteinID:
BAK70189
LinkDB
All DBs
Position
complement(483903..484511)
Genome browser
AA seq
202 aa
AA seq
DB search
MFRNIKNYFNKKNLKDKKYLYLFEDSQIKDEYVCFDCETTGLNPKKDDIISIGAVIIKDN
TIISSKKFVKFIKPKTKLQAEAIKVHHIRECDLNNANDIDLVIEEFLEFIGNRTLVGYFL
EFDISMINKYLKPKLGITLPNKTLEVSEIYHDYKIEIIPQGHIDLRFNSIMEELEIPSLG
KHDAFNDALMTAMIFIKLKNIA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaaatataaaaaactattttaataaaaaaaatctaaaagataaaaaatattta
tatctatttgaagattcacaaataaaggatgaatatgtttgttttgactgtgaaactaca
ggtcttaatcctaaaaaagacgatattatctccataggcgcggtgataataaaagataat
actattatatctagtaaaaaatttgtcaagtttataaaaccaaaaactaaacttcaagct
gaagctataaaagttcatcatattagagaatgtgatttaaataacgcaaatgatatagat
ttggttattgaagaatttttagaatttataggtaatagaactttagttggatatttttta
gagtttgatatctctatgataaacaaatatcttaaaccaaaacttggaataactcttcct
aataaaactcttgaagtctcagaaatataccacgattataaaatagaaataattcctcaa
gggcatatagatttaagatttaattcgattatggaagaactagaaataccaagtcttggt
aaacatgatgcatttaatgatgcattaatgactgctatgatttttataaaactaaaaaat
atagcgtaa
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