Aliarcobacter butzleri ED-1: ABED_0535
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Entry
ABED_0535 CDS
T01823
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
abt
Aliarcobacter butzleri ED-1
Pathway
abt03420
Nucleotide excision repair
abt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABED_0535
03430 Mismatch repair
ABED_0535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abt03400
]
ABED_0535
Enzymes [BR:
abt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABED_0535
DNA repair and recombination proteins [BR:
abt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABED_0535
MMR (mismatch excision repair)
Other MMR factors
ABED_0535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAK70252
LinkDB
All DBs
Position
558075..560120
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AA seq
681 aa
AA seq
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MPLSNLNQEQLQAATCHQGFNLIIASAGTGKTSTIVGRIAYLLNSGIHPKEILLLTFTNK
AAAEMINRVAKFFGKDIAKEIMAGTFHSVSYKLLKELNVNITLKQPNELKTLFKSIYEKR
VFFDRSDEVSPYDGGYLYDMYSLYLNSNDGEDFASWIVSKNSSHEIYTLIYEDVVDEFNE
LKTKYGYVNFDDLLTTMLKILKEKDFDFKEILVDEYQDTNPLQGRLLDSFRPKSLFCVGD
YDQSIYAFNGSDIGIISTFSTRYKDANVFTLRKNYRSTKPILDLATKVIEFNERVYEKKL
EVVRKEDIYKPKLLAFNELFSQYEYISELISKSQTPHSEIAIIYRNNSSADGIEANLREF
GIAAKRKGGMSFFDSVEVKFILDILVMQVSHNDMMAFIHIVEHGKGIGKAIAKDIFDALI
KLGDGDIIRGLFQPRIDISNPYETKVKNQQLGLFDDFIELGSISKFKDCNFEETFLSNPI
LKHPKLSVDGGKYLYDIYLLLKHLRRTKIPETLVASISSSMAYSKLKDFLATKRATQKDG
TINDIQKTKALAKINRKAMLLKNLARNFNDLSKFINSMILGGSEMSEGEGVNLLSIHASK
GLEFKEVYVIDLMDGRFPNRKLMSKGGSLEEERRLFYVAVTRAKDILYLSYAKYDKIKKM
TFVASPFLKEAGMAINEEEDS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatcaaatttaaatcaagaacaattacaagcagcaacttgccaccaaggattt
aatcttataattgcaagtgcaggaacaggaaaaacttcaacaattgttggaagaattgct
tatttattaaatagtggaatacatccaaaagagattttacttttaactttcacaaataaa
gcagcagcagaaatgataaatagagttgcgaaattttttggaaaagatatagcaaaagag
attatggcaggaacttttcactctgtttcttataaacttctaaaagaactaaatgtaaat
attactttaaaacaaccaaatgaactaaaaacacttttcaaatcaatatatgaaaaaaga
gttttttttgatagaagtgatgaagtttctccttatgatggtggatatttatatgatatg
tactctttatacttaaattcaaatgatggagaagattttgcttcttggatagtatcaaaa
aactcttctcatgaaatatacactttaatttatgaagatgttgttgatgaatttaacgaa
ctaaaaacaaaatatggttatgtaaactttgatgatttacttacaactatgcttaaaatc
ttaaaagagaaagattttgattttaaagagatacttgttgatgagtaccaagatacaaat
cctcttcaaggaagacttcttgactcttttagaccaaaatcacttttttgtgttggagat
tatgatcaaagtatttatgcttttaatggttctgatataggaataatttctacattttca
acaagatacaaagatgcaaatgtttttactttaagaaaaaattatcgttcaacaaaacct
attttggatttagcaacaaaagttatagagtttaatgaaagagtttatgaaaaaaaactc
gaagttgtaagaaaagaagatatttataaaccaaaacttttagcttttaatgaacttttt
tcacaatatgagtatatttcagaacttatttctaaaagccaaacacctcatagtgaaata
gcaataatatatagaaacaactcaagtgcagatggaatagaagcaaatttaagagaattt
ggaattgctgctaaaagaaaaggtggaatgagcttttttgactcggttgaagtaaaattt
atccttgatattttagtgatgcaagtttctcacaatgatatgatggcatttattcatata
gttgaacatggaaaaggaataggaaaagctattgcaaaagatatttttgatgctttaatt
aaacttggtgatggagatattataagaggattatttcaacctagaattgatatctcaaat
ccttatgaaacaaaagtgaaaaatcaacaattaggactttttgatgattttatagagtta
ggttcaatttcaaaatttaaagattgcaattttgaagagacttttttaagtaatcctata
ctaaaacatccaaaattaagcgttgatggtggaaaatatctttatgatatttatttactt
ttaaaacatttaagaagaacaaaaattcctgaaacattagttgcaagtatatcttcttcg
atggcatattcaaaattaaaagattttttagcaacaaaaagagcaacacaaaaagatgga
acaataaacgatattcaaaaaacaaaagcactagcaaaaataaatagaaaagcgatgctt
ttaaaaaatctagcaagaaattttaatgatttatcgaagtttataaactctatgatttta
ggtggaagtgaaatgagtgaaggtgagggagtaaatctactttctattcacgcaagtaaa
ggtttagagtttaaagaagtttatgtaatagatttaatggatggaagatttccaaataga
aaacttatgagtaaaggtggaagtttagaagaagaacgaagacttttttatgttgcagtg
acacgtgcaaaagatattttgtatttatcttatgcaaaatatgacaaaataaaaaagatg
acatttgtagcaagtccctttttaaaagaagcaggaatggctataaatgaagaagaggat
tcttaa
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