Aliarcobacter butzleri ED-1: ABED_0689
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Entry
ABED_0689 CDS
T01823
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
abt
Aliarcobacter butzleri ED-1
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abt03016
]
ABED_0689
Enzymes [BR:
abt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ABED_0689
Transfer RNA biogenesis [BR:
abt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABED_0689
Prokaryotic type
ABED_0689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BAK70406
LinkDB
All DBs
Position
713787..714851
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AA seq
354 aa
AA seq
DB search
MEQLQRYLNHSKIDVVFKQSKDDFVVTEIPLYEFSGEGEHLILKLRKKDLATWDAIEILA
RYLECSTREFGYAGLKDKNAMTIQSISIHRKFEEKLQNFQHENIKILETTYHNNKIKIGH
LKGNKFFIRLKRVGLVEKRKIEEALGQIATFGIPNYFGFQRFGIEGDNYKKGKDIIDGKL
KERNRNLKQMYINAYQSYLFNSWLSRRIEISKLIDAFEPKEIYQKLNLPLEVVKRMKKQK
HPFKIMTGDLLSHYPFGKIFTIEDLETESLKFYERDRVPTGLLSGKRVKNSEGLAYEIER
EFEEDINEDGARRFAWIFPEELESNYKEDKNWIELQFYLPKGSYATEVIAEIIH
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
ttggaacaattacaaagatatttaaatcactctaaaatagatgtagtatttaagcaaagc
aaagatgattttgtggttacagaaataccactttatgagttctcaggtgagggtgaacat
cttatattaaaattaagaaaaaaagatttagcaacttgggatgctattgaaatcttagca
agatatttagagtgtagtacaagagagtttggatatgcaggacttaaagataaaaatgcg
atgacaatccaatctatttctattcatagaaaatttgaagaaaaattacaaaactttcaa
cacgaaaatataaaaatacttgaaacaacttatcataataataaaatcaaaattggacat
ttaaaaggtaataaattttttattagattaaaaagagtagggctagttgagaaaagaaaa
attgaagaggccttaggtcaaattgctacttttggaattccaaattactttggtttccaa
agatttggaatagaaggtgataattataaaaaaggtaaagatataattgatggaaaatta
aaagagagaaatagaaacttaaaacaaatgtacatcaatgcttatcaaagttatcttttt
aactcttggctttctagaagaatagaaatttcaaaacttattgatgcttttgaaccaaaa
gagatctatcaaaaattaaatcttccacttgaagttgtaaaaagaatgaaaaaacaaaaa
cacccttttaaaattatgacaggtgatttattatcgcattatccttttggaaaaattttc
actattgaagatttagaaacagaatctttaaaattttatgaaagagatagagtaccaact
ggtcttttatctggtaaaagagtaaaaaattctgaaggtttagcttacgaaatagaaaga
gagtttgaagaagatataaacgaagatggagcaagaagatttgcttggatttttcctgaa
gaattagaaagtaattataaagaagataaaaattggatagaactacaattttatcttcca
aaaggctcttacgcaactgaagtaattgcagaaataattcattaa
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