Aliarcobacter butzleri ED-1: ABED_1088
Help
Entry
ABED_1088 CDS
T01823
Name
(GenBank) recombination and DNA strand exchange inhibitor
KO
K07456
DNA mismatch repair protein MutS2
Organism
abt
Aliarcobacter butzleri ED-1
Pathway
abt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ABED_1088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abt03400
]
ABED_1088
DNA repair and recombination proteins [BR:
abt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
ABED_1088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smr
MutS_V
AAA_23
AAA_14
MSSS
DUF2118
DUF1120
Nup88
Exonuc_VII_L
YlqD
SMC_N
Motif
Other DBs
NCBI-ProteinID:
BAK70805
LinkDB
All DBs
Position
1109402..1111603
Genome browser
AA seq
733 aa
AA seq
DB search
MENLIKKLDLNDYIDNFSKLFARDKSIILEGDINIHHKLINELSKFDFKAPPKVENLDSA
LMHIQKQGTLKIYEIFEFIKIVEYFRYLKRFNFEGKLLEWIEKIVIPSDIIKIADYFDEK
ANLKDGVDEDFDNIKYAISKNKENIKQSLYKIVNSSKIRPYLVDMQVHLVNGEEALLVRG
GFNHVLSGSVIDRSNSGFFYVVPHSISELKQKESDLKNKQEEILFKLCREISSIFEKNLL
FLKFINKEFDRFDHYQARLFFAKIGDKIFVLPSKNEENRLVDFCHPALHNPKPISIDFTK
NVVMITGVNAGGKTMMLKSILSAVFLSKYLLPYKAHQNTVISNFKFINAVLDDPQSVKND
ISTFAGRMVEFSKLFGSKNAIVGVDEIELGTDSDEAASLFKVMIEDLIQRDIKVIITTHH
KRLAALMASNDNVELIAALYDEENQKPTYEFLQGTIGRSYAFETALRYGIPLNVVKRAKE
VYGEDKDKLNELIERSSSLEREYRQKIATLDEEIANMKRVTNNLKEQKEKLDEHIYSEKS
KLHKEYSEARDEAKKAIKAKLVQESHQHLNISHKMAKEIKVEKVQEVIEFKVGDRVKYRN
TKGAIVSIKGSKAFIENDMGMKVQVNLSDLSRSGNPPPKIPTKKATVTISKPETGSIKLD
LHGQRADEAIENLDKFLSDALLAGFEEVLVYHGIGTGKLAFAVKEFLKKHPRVKGFEDAH
PSSGGFGAKVIKL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttaataaaaaaactagacttaaatgattatatagataatttttctaagctt
tttgctagagataaatctattattttagaaggtgatataaatattcatcataaacttatc
aatgaactatcaaaatttgattttaaagcaccaccaaaagttgaaaatcttgattcagct
ttaatgcatattcaaaaacaaggtactttaaaaatttatgaaatatttgaatttataaaa
atcgtagagtattttagatacctaaaaagatttaattttgaaggaaagttacttgaatgg
attgaaaaaatagttattccttctgatattataaaaattgctgattattttgatgaaaaa
gcaaatttaaaagatggtgttgatgaagattttgacaatataaaatatgctatttcaaaa
aataaagaaaatataaaacaaagcctttataaaattgtaaattcatcaaaaataagacca
tatttagttgatatgcaagttcatttagtaaatggagaagaagctttacttgttcgaggt
ggatttaaccatgtacttagtggaagtgtaattgatagatcaaactctggatttttttat
gttgtgcctcatagtattagtgaattaaaacaaaaagagagtgatttaaaaaataaacaa
gaagagattttatttaaactttgtagagaaatttcttcaatttttgaaaaaaacttatta
tttttgaaatttataaataaagagtttgatagatttgatcactatcaagcaagactattt
tttgcaaaaataggtgataaaatttttgtattaccttcaaaaaatgaggaaaatagactt
gtagatttttgtcatcccgcacttcataatccaaaacctatatctattgattttacaaaa
aacgtagttatgataacaggagtaaatgctggagggaaaactatgatgctaaaatcaatt
ttaagtgcagttttcctttcaaaatatcttttaccttataaagctcatcaaaatacagtt
attagtaattttaaatttataaatgcagttttagatgacccacaaagtgtaaaaaatgat
atttcgacatttgctggtcgtatggttgaattttcaaaactttttggttcaaaaaatgca
attgttggagttgatgaaatagaactaggaactgattcagatgaagctgctagtttattt
aaagttatgatagaagatttaattcaaagagatataaaagtgattattacaactcaccat
aaaagattagctgcactcatggcttcaaatgataatgtagaattaattgcagcactttat
gatgaagagaatcaaaagccaacttatgaatttttacaaggaacaataggtagatcttat
gcttttgaaactgctttaagatatggaatacctttaaatgttgtaaaaagagcaaaagaa
gtttatggtgaagataaagataaattaaatgaactaattgaaagaagtagctctttagaa
agagaatatagacaaaaaatagcaactttagatgaagaaatagcaaatatgaaaagagtt
acaaataatctaaaagagcaaaaagaaaaacttgatgaacacatctattcagaaaaatca
aaacttcataaagagtatagtgaagcaagagatgaagcaaaaaaagccattaaagcaaaa
cttgtacaagaatcacatcaacatctaaatatttcacacaaaatggcaaaagaaataaaa
gttgaaaaagttcaagaagttatagaattcaaagtaggtgatagagtaaaatatagaaat
acaaaaggagctattgtttctataaaaggaagtaaagcatttattgaaaatgatatggga
atgaaagttcaagttaatttaagcgatttaagtagaagtggaaatccacctccaaaaatt
ccaacaaaaaaagcaactgttactatttctaaacctgaaactggaagtattaaactagat
cttcatggtcaaagagcagatgaagctattgaaaatcttgataagtttttaagtgatgca
ctattagctggttttgaagaagttttagtttatcatggaattggaactggaaaattagcg
tttgcagtaaaagagtttttaaaaaagcatccaagagtaaaaggttttgaagatgctcat
ccaagtagtggaggttttggagctaaagtaattaaactctag
DBGET
integrated database retrieval system
