Aliarcobacter butzleri ED-1: ABED_1290
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Entry
ABED_1290 CDS
T01823
Name
(GenBank) exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
abt
Aliarcobacter butzleri ED-1
Pathway
abt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABED_1290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abt03400
]
ABED_1290
Enzymes [BR:
abt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABED_1290
DNA repair and recombination proteins [BR:
abt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABED_1290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
HHH_RecD2
AAA_19
UvrD_C_2
OB_YrrC
Viral_helicase1
SH3_13
HHH_5
PIF1
Mg_chelatase
PhoH
Ribosomal_S13
AAA_5
AAA
UvrD_C
AAA_22
AAA_16
ABC_tran
Class_2_docking_dom
T2SSE
Motif
Other DBs
NCBI-ProteinID:
BAK71007
LinkDB
All DBs
Position
complement(1319745..1322072)
Genome browser
AA seq
775 aa
AA seq
DB search
MQEEYKSFKLSGVIKKVLYKNDETKYIIAVLENNQKVCGTYFDTDIEKIVGEEVVLTGNW
TTHKKYGVQFEFDTLELKEAEMFFFLTKIVKGVGKKFASELLEKYSENELIEILNDRPNE
LLNFKGIKDKKLETIVASWHKFKHLRELGSFLGKFGVTSNLITKIYSTFGEVENLIEKIK
QNPYILINIKGIGFKRADEIAKSLGIDPKSEFRIMACLNYTLREFCDNNGNSSIDKFHLY
KLLDESLRFSNQELLYESAISKMLVDEELFVTSENRVALSMLYYAEKRILEFFNRRKDEK
NKKIIASFDEYLVKKQETLGFELSVEQKKAVELINSGEKTLFLIGYAGTGKSTSSRAILE
LLEEIMSYDDIMTIALSGIASQRISDTTGYNSSTIQSLLVKHKEKDFFPYKAILLDEASM
VNSVTFYQIISKIDDDTIFIIVGDDGQLPAIGAGNILADAIKYELAPICKLTKIYRQNEN
QAIAVIANDIRRGEIPSYKEDYEDFRFIDVSIANYYAMKNSVSSNDFADLRGENSEYILN
NILNISSTYIQDYYDFIKKKKISKALTLFQVITPMKGGVLGVDNLNIQLQKLFNHTKGKA
FASKIYEYKLTDKVIHIKNENMKAQTMSMYKSGLTDFLERRVYNGQLGLIIKLDFEEEKC
IVLYPNDDMVVFYDFENVHHLLSLAYCLTIHKTQGMEYDNALIPMSFSHYIMHNTKLLYT
AITRAKKMCFIVGEEEAFKSACKKLEITIRESVINDLLSKKEPKIELSNIEMITI
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagagtataaaagtttcaaattatcaggagttataaaaaaagttttatataaa
aatgatgaaacaaaatacataattgctgttttagaaaataatcaaaaagtttgtggaaca
tattttgatactgatattgaaaaaatagttggtgaagaggttgttttaactggaaattgg
actacacataaaaagtatggtgttcaatttgagtttgatactttagaactaaaagaagca
gaaatgttcttttttcttacaaagattgtaaaaggtgtaggaaaaaaatttgctagcgaa
cttttagaaaaatatagtgaaaatgaactaattgaaattttaaatgatagaccaaatgaa
cttttaaatttcaaaggtataaaagataaaaaactagaaactattgttgcatcttggcat
aagttcaaacatttaagagaacttggttcatttttaggaaaatttggggtaacttcaaac
ttaattacaaaaatatattcaacttttggtgaagttgaaaatttaatagaaaaaatcaaa
caaaatccatatatcttgataaatataaaaggaataggttttaaaagagctgatgaaata
gcaaaatctcttggaattgacccaaaatcagagtttagaataatggcttgtctaaactat
actttaagagagttttgcgataacaacggaaactcttcaatagacaaatttcatctatat
aaacttttagatgaaagtttgagattttcaaatcaagaacttttatatgaatcagcaatt
tcaaaaatgttagtagatgaagagctttttgttacaagtgaaaatagagttgcactttct
atgctttattatgcagaaaaaagaattttagagttttttaatagaagaaaagatgaaaag
aacaaaaaaattattgcttcttttgatgaatatttagttaaaaaacaagaaactttaggg
tttgaacttagtgttgagcaaaaaaaagcagttgaacttataaatagtggagaaaaaact
ctatttttgattggttacgctggtactggaaaatcaacttcaagtagggcgatattagaa
cttcttgaagagataatgagttatgatgatattatgactattgctttaagtggaatagca
agtcaaagaataagtgatacaacaggttataactcttcaactattcaaagtttacttgta
aaacataaagagaaagatttttttccttataaagctattttacttgatgaagcttctatg
gtaaattcagttactttttatcaaattatttcaaaaattgatgatgatactatttttata
atcgttggagatgatggacagcttcctgctattggagctggaaatattttagcagatgca
ataaaatatgaattagcacctatttgtaaacttacaaaaatttatagacaaaatgaaaat
caagcaatagcagttattgcaaatgatataagacgtggtgaaattccttcttataaagaa
gattacgaagattttaggtttattgatgtttcaatagcaaactattatgcaatgaaaaac
tctgtttcatcaaatgattttgcagatttaagaggtgaaaatagcgaatatattttaaat
aatattttaaatatctcttcaacttatatccaagattattatgattttataaaaaagaaa
aaaatatcaaaagctttgactctttttcaagtaattactccaatgaaaggaggagtttta
ggagttgataatctaaatattcaacttcaaaagctttttaatcacacaaaaggaaaagct
tttgcttcaaaaatttatgaatataaacttacagataaagtaattcatataaaaaatgag
aatatgaaagctcaaactatgagtatgtataaaagtggcttaacggattttttagaaaga
agagtttataacggacaattaggtcttataataaaacttgattttgaagaagaaaaatgt
atcgttttatatccaaatgatgatatggtagtattttatgattttgaaaatgttcatcat
cttttatctttggcttactgtttaactattcataaaactcaaggaatggagtatgataat
gcacttattcctatgagtttttctcactatattatgcataatacaaaactactttataca
gcaattacaagagcaaaaaaaatgtgttttattgttggagaagaagaggcttttaaaagt
gcttgtaaaaaactagaaattacaataagagaatcagtaataaatgatttattaagtaaa
aaagagccaaaaattgagttgtcaaatatcgaaatgattactatttaa
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